Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.2□□□□□ -2.06
LSM1O15116 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.2□□□□□ -2.06
LSM1O15116 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 PAXBP1P1-201ENST00000449315 447 ntBASIC2.2□□□□□ -2.06
LSM1O15116 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
LSM1O15116 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
LSM1O15116 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
LSM1O15116 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
LSM1O15116 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.2□□□□□ -2.06
LSM1O15116 AC006199.1-201ENST00000548728 219 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.2□□□□□ -2.06
LSM1O15116 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 MIR4293-201ENST00000584305 78 ntBASIC2.2□□□□□ -2.06
LSM1O15116 DNAJC19P3-201ENST00000594491 331 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM1O15116 BNIP3P31-201ENST00000604515 566 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AL450336.1-201ENST00000605180 586 ntBASIC2.2□□□□□ -2.06
LSM1O15116 AL121917.1-203ENST00000605534 577 ntBASIC2.2□□□□□ -2.06
LSM1O15116 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
LSM1O15116 AC004808.1-201ENST00000627671 721 ntBASIC2.2□□□□□ -2.06
LSM1O15116 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LSM1O15116 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM1O15116 FAM133CP-201ENST00000332869 704 ntBASIC2.19□□□□□ -2.06
LSM1O15116 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LSM1O15116 RNU6-462P-201ENST00000362659 105 ntBASIC2.19□□□□□ -2.06
LSM1O15116 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
LSM1O15116 MTCO1P17-201ENST00000411522 491 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC009963.1-201ENST00000417265 157 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM1O15116 EIF4EP4-201ENST00000424916 578 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AL445669.1-201ENST00000426743 755 ntBASIC2.19□□□□□ -2.06
LSM1O15116 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
LSM1O15116 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.19□□□□□ -2.06
LSM1O15116 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.19□□□□□ -2.06
LSM1O15116 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.19□□□□□ -2.06
LSM1O15116 RNA5SP233-201ENST00000459153 113 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC072039.1-201ENST00000477611 581 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC108729.1-201ENST00000487812 947 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM1O15116 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.19□□□□□ -2.06
LSM1O15116 AC093809.1-201ENST00000509155 340 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC116353.3-201ENST00000511215 249 ntBASIC2.19□□□□□ -2.06
LSM1O15116 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM1O15116 OR5AQ1P-201ENST00000527596 927 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC093012.1-202ENST00000549403 582 ntBASIC2.19□□□□□ -2.06
LSM1O15116 MRPS36P5-201ENST00000551909 298 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC027176.1-201ENST00000560204 514 ntBASIC2.19□□□□□ -2.06
LSM1O15116 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM1O15116 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.19□□□□□ -2.06
LSM1O15116 AC069431.2-201ENST00000604149 1099 ntBASIC2.19□□□□□ -2.06
LSM1O15116 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM1O15116 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM1O15116 AC004908.2-201ENST00000609090 574 ntBASIC2.19□□□□□ -2.06
LSM1O15116 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
LSM1O15116 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM1O15116 MIR3199-2-201ENST00000636243 86 ntBASIC2.19□□□□□ -2.06
LSM1O15116 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.19□□□□□ -2.06
LSM1O15116 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LSM1O15116 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM1O15116 RNA5SP125-201ENST00000364843 120 ntBASIC2.18□□□□□ -2.06
LSM1O15116 U6atac.2-201ENST00000408644 118 ntBASIC2.18□□□□□ -2.06
LSM1O15116 RNU2-68P-201ENST00000410878 191 ntBASIC2.18□□□□□ -2.06
LSM1O15116 RNU4-22P-201ENST00000411058 166 ntBASIC2.18□□□□□ -2.06
LSM1O15116 ZNF90P2-204ENST00000419323 1075 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM1O15116 MTCO2P20-201ENST00000437339 673 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 EEF1A1P39-201ENST00000440791 250 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.18□□□□□ -2.06
LSM1O15116 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.18□□□□□ -2.06
LSM1O15116 ELOCP30-201ENST00000447108 299 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.18□□□□□ -2.06
LSM1O15116 RPL23AP49-201ENST00000492925 468 ntBASIC2.18□□□□□ -2.06
LSM1O15116 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM1O15116 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM1O15116 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LSM1O15116 AC234778.2-201ENST00000566241 354 ntBASIC2.18□□□□□ -2.06
LSM1O15116 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 DPPA3P3-201ENST00000603842 430 ntBASIC2.18□□□□□ -2.06
LSM1O15116 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LSM1O15116 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
LSM1O15116 AC107214.2-201ENST00000608204 634 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 AC007490.1-201ENST00000624321 703 ntBASIC2.18□□□□□ -2.06
LSM1O15116 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM1O15116 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
LSM1O15116 AC099786.3-201ENST00000565735 1410 ntBASIC2.17□□□□□ -2.06
LSM1O15116 RNU6-188P-201ENST00000364207 107 ntBASIC2.17□□□□□ -2.06
LSM1O15116 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.17□□□□□ -2.06
LSM1O15116 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LSM1O15116 MIR218-1-201ENST00000384999 110 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms