Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MED14P1-201ENST00000430517 648 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.38□□□□□ -2.19
SDCBPO00560 AL513124.1-201ENST00000450410 614 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC079776.3-201ENST00000450665 370 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.38□□□□□ -2.19
SDCBPO00560 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SDCBPO00560 AC026414.1-201ENST00000504046 698 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SDCBPO00560 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.38□□□□□ -2.19
SDCBPO00560 AP005435.4-201ENST00000529514 284 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC118273.2-201ENST00000532092 465 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AK6P1-201ENST00000540219 478 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.38□□□□□ -2.19
SDCBPO00560 AL133241.1-201ENST00000556832 487 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC005261.5-201ENST00000596280 355 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC025165.5-201ENST00000602802 578 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC005776.1-201ENST00000603164 290 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC011451.2-201ENST00000604303 598 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC012467.1-201ENST00000607740 256 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AP005229.2-201ENST00000609980 697 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 MIR8081-201ENST00000611533 95 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC013476.2-201ENST00000614456 459 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.38□□□□□ -2.19
SDCBPO00560 AC109809.1-201ENST00000619665 545 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SDCBPO00560 AC007490.1-201ENST00000624321 703 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.38□□□□□ -2.19
SDCBPO00560 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
SDCBPO00560 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SDCBPO00560 AL356292.1-201ENST00000283110 373 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 Y_RNA.408-201ENST00000383987 102 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SDCBPO00560 RN7SKP158-201ENST00000410453 326 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 POLHP1-201ENST00000411806 470 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 SNORD56-201ENST00000413522 71 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC096649.2-201ENST00000416186 393 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL451054.2-201ENST00000420896 202 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC016691.1-201ENST00000441321 413 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC002381.1-201ENST00000447049 280 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 RPL23AP42-201ENST00000471152 471 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.37□□□□□ -2.19
SDCBPO00560 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.37□□□□□ -2.19
SDCBPO00560 MIR892C-201ENST00000516410 77 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 RNU6-295P-201ENST00000516901 104 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 RNU6-714P-201ENST00000516963 103 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC084851.1-201ENST00000529105 249 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.37□□□□□ -2.19
SDCBPO00560 DEFB122-202ENST00000569013 197 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC090615.1-201ENST00000577519 154 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC022662.1-201ENST00000580252 331 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL109918.3-201ENST00000603072 338 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL391813.1-201ENST00000603098 260 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC004908.2-201ENST00000609090 574 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AL138478.1-201ENST00000612252 832 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC024257.5-201ENST00000612739 531 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 MIR6845-201ENST00000613182 61 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC107075.1-201ENST00000613695 314 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 AC010678.1-201ENST00000614118 713 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 PISRT1-201ENST00000626175 531 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 MIR7157-201ENST00000635801 60 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 U2.21-201ENST00000637295 81 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SDCBPO00560 AC005539.1-201ENST00000443768 1479 ntBASIC1.37□□□□□ -2.19
SDCBPO00560 MTND4P23-201ENST00000447723 1363 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AL589826.1-201ENST00000340697 249 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNA5SP276-201ENST00000362580 94 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU6-468P-201ENST00000384003 109 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SDCBPO00560 RPL7P27-201ENST00000403775 720 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 RNU2-42P-201ENST00000410697 113 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 TPMTP2-201ENST00000414372 726 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.36□□□□□ -2.19
SDCBPO00560 OOSP1P1-201ENST00000423265 274 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 XKRYP1-201ENST00000423438 492 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC096920.1-201ENST00000423991 241 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 C1DP1-201ENST00000426049 402 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 DPRXP1-201ENST00000426312 460 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC010153.1-201ENST00000432862 727 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 XKRYP2-201ENST00000432915 492 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.36□□□□□ -2.19
SDCBPO00560 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.36□□□□□ -2.19
SDCBPO00560 AC080013.2-201ENST00000460866 323 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 AC092902.1-201ENST00000486999 259 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 HMGB1P36-201ENST00000487709 576 ntBASIC1.36□□□□□ -2.19
SDCBPO00560 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms