Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.01□□□□□ -2.09
DFFAO00273 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.01□□□□□ -2.09
DFFAO00273 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.01□□□□□ -2.09
DFFAO00273 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.01□□□□□ -2.09
DFFAO00273 AC013267.1-201ENST00000458227 267 ntBASIC2.01□□□□□ -2.09
DFFAO00273 MTAPP1-201ENST00000489154 819 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.01□□□□□ -2.09
DFFAO00273 LTV1P1-201ENST00000510683 1237 ntBASIC2.01□□□□□ -2.09
DFFAO00273 SNORA31.6-201ENST00000516241 130 ntBASIC2.01□□□□□ -2.09
DFFAO00273 HSPE1P18-201ENST00000517602 280 ntBASIC2.01□□□□□ -2.09
DFFAO00273 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
DFFAO00273 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.01□□□□□ -2.09
DFFAO00273 MIR3199-1-201ENST00000582434 88 ntBASIC2.01□□□□□ -2.09
DFFAO00273 BNIP3P26-201ENST00000600827 554 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC008121.1-201ENST00000603244 268 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC004805.2-201ENST00000605382 482 ntBASIC2.01□□□□□ -2.09
DFFAO00273 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AL031601.2-202ENST00000622650 282 ntBASIC2.01□□□□□ -2.09
DFFAO00273 AC244517.12-201ENST00000623581 663 ntBASIC2.01□□□□□ -2.09
DFFAO00273 U2.21-201ENST00000637295 81 ntBASIC2.01□□□□□ -2.09
DFFAO00273 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
DFFAO00273 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
DFFAO00273 RNU6-560P-201ENST00000364007 108 ntBASIC2□□□□□ -2.09
DFFAO00273 RNU6-289P-201ENST00000364093 107 ntBASIC2□□□□□ -2.09
DFFAO00273 Y_RNA.245-201ENST00000364493 95 ntBASIC2□□□□□ -2.09
DFFAO00273 RNU6-621P-201ENST00000364752 109 ntBASIC2□□□□□ -2.09
DFFAO00273 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
DFFAO00273 MIR1284-201ENST00000408337 120 ntBASIC2□□□□□ -2.09
DFFAO00273 RNU4-26P-201ENST00000410270 107 ntBASIC2□□□□□ -2.09
DFFAO00273 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
DFFAO00273 AL449283.1-202ENST00000418249 604 ntBASIC2□□□□□ -2.09
DFFAO00273 EIF1AXP1-201ENST00000419267 435 ntBASIC2□□□□□ -2.09
DFFAO00273 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2□□□□□ -2.09
DFFAO00273 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2□□□□□ -2.09
DFFAO00273 ELOCP14-201ENST00000428070 331 ntBASIC2□□□□□ -2.09
DFFAO00273 MICF-203ENST00000432679 129 ntBASIC2□□□□□ -2.09
DFFAO00273 AC010153.1-201ENST00000432862 727 ntBASIC2□□□□□ -2.09
DFFAO00273 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2□□□□□ -2.09
DFFAO00273 SNRPEP7-201ENST00000438350 220 ntBASIC2□□□□□ -2.09
DFFAO00273 ELOCP7-201ENST00000439968 331 ntBASIC2□□□□□ -2.09
DFFAO00273 TPT1P14-201ENST00000448018 505 ntBASIC2□□□□□ -2.09
DFFAO00273 ZNF886P-201ENST00000450781 723 ntBASIC2□□□□□ -2.09
DFFAO00273 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2□□□□□ -2.09
DFFAO00273 ANKRD26P4-201ENST00000455755 950 ntBASIC2□□□□□ -2.09
DFFAO00273 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
DFFAO00273 RPS15AP36-201ENST00000492022 382 ntBASIC2□□□□□ -2.09
DFFAO00273 AC110760.3-202ENST00000515177 371 ntBASIC2□□□□□ -2.09
DFFAO00273 RNU6-927P-201ENST00000516199 100 ntBASIC2□□□□□ -2.09
DFFAO00273 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2□□□□□ -2.09
DFFAO00273 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2□□□□□ -2.09
DFFAO00273 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2□□□□□ -2.09
DFFAO00273 FAM92A1P1-201ENST00000528023 890 ntBASIC2□□□□□ -2.09
DFFAO00273 AC023538.1-201ENST00000534576 736 ntBASIC2□□□□□ -2.09
DFFAO00273 AL606834.3-201ENST00000602615 496 ntBASIC2□□□□□ -2.09
DFFAO00273 AL391813.1-201ENST00000603098 260 ntBASIC2□□□□□ -2.09
DFFAO00273 AC025588.2-201ENST00000604851 466 ntBASIC2□□□□□ -2.09
DFFAO00273 AC090186.1-201ENST00000605991 572 ntBASIC2□□□□□ -2.09
DFFAO00273 YWHAEP7-203ENST00000622054 312 ntBASIC2□□□□□ -2.09
DFFAO00273 LINC02211-204ENST00000642024 1070 ntBASIC2□□□□□ -2.09
DFFAO00273 AC004944.1-201ENST00000517807 3059 ntBASIC2□□□□□ -2.09
DFFAO00273 MTND5P29-201ENST00000458676 1807 ntBASIC2□□□□□ -2.09
DFFAO00273 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
DFFAO00273 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
DFFAO00273 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2□□□□□ -2.09
DFFAO00273 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
DFFAO00273 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
DFFAO00273 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DFFAO00273 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DFFAO00273 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
DFFAO00273 RNU6-778P-201ENST00000363269 103 ntBASIC1.99□□□□□ -2.09
DFFAO00273 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.99□□□□□ -2.09
DFFAO00273 AL109913.1-201ENST00000421173 514 ntBASIC1.99□□□□□ -2.09
DFFAO00273 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.99□□□□□ -2.09
DFFAO00273 MTND1P28-201ENST00000435623 950 ntBASIC1.99□□□□□ -2.09
DFFAO00273 MTATP6P7-201ENST00000453315 681 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.99□□□□□ -2.09
DFFAO00273 AC008481.1-201ENST00000463278 396 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AC090515.1-201ENST00000465295 476 ntBASIC1.99□□□□□ -2.09
DFFAO00273 TRBV1-201ENST00000476502 284 ntBASIC1.99□□□□□ -2.09
DFFAO00273 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 MTND5P13-201ENST00000513046 1079 ntBASIC1.99□□□□□ -2.09
DFFAO00273 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 RANP3-201ENST00000530970 276 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AC010186.2-204ENST00000537668 439 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.99□□□□□ -2.09
DFFAO00273 AC007151.1-201ENST00000572774 483 ntBASIC1.99□□□□□ -2.09
DFFAO00273 MIR5571-201ENST00000577998 113 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AC024619.4-201ENST00000580924 316 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
DFFAO00273 UBE2L4-201ENST00000587688 464 ntBASIC1.99□□□□□ -2.09
DFFAO00273 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.99□□□□□ -2.09
DFFAO00273 AC087241.4-201ENST00000612441 480 ntBASIC1.99□□□□□ -2.09
DFFAO00273 AL121895.2-201ENST00000619558 447 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms