Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 TXNP7-201ENST00000406296 293 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RNA5SP38-201ENST00000410750 119 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MTND4P6-201ENST00000438297 472 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AL078601.1-201ENST00000444542 271 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SUMO2P2-201ENST00000456482 255 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC092757.1-201ENST00000467293 467 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MTND2P7-201ENST00000521337 640 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MIR3908-201ENST00000579798 126 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 COX6CP3-201ENST00000580869 223 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AL590282.1-201ENST00000610379 1136 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC253576.2-201ENST00000618815 580 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC008133.2-201ENST00000624540 351 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC025263.3-201ENST00000622965 1396 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RNU6-839P-201ENST00000363347 108 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RNU5E-10P-201ENST00000363506 118 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 snoZ40.1-201ENST00000364540 72 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RNU6-335P-201ENST00000364563 113 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 MIR607-201ENST00000385241 96 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RNU1-139P-201ENST00000391307 165 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RPS4XP3-201ENST00000398541 413 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RNU2-15P-201ENST00000410692 191 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 TIMM9P2-201ENST00000419324 266 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 MTATP6P4-201ENST00000427725 675 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC005534.2-201ENST00000431047 433 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 SNORA31.20-201ENST00000517111 133 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC121758.2-201ENST00000553271 193 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL049838.1-201ENST00000563647 981 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RN7SL793P-201ENST00000583259 296 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL109653.1-201ENST00000603091 248 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC018755.4-201ENST00000619715 454 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RNA5SP457-201ENST00000363657 124 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 SNRPEP2-201ENST00000397592 279 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RPS3AP24-201ENST00000407896 734 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC069282.1-201ENST00000411911 526 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 TPMTP2-201ENST00000414372 726 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 BTF3P8-201ENST00000414577 526 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RPS24P6-201ENST00000452670 400 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL109741.2-201ENST00000455561 343 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 RPL30P14-201ENST00000482744 348 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC134050.1-201ENST00000495088 933 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC110792.2-201ENST00000510278 224 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 DEFB130C-202ENST00000530001 230 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 SETP2-201ENST00000553886 926 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL022067.1-201ENST00000602426 454 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC004009.2-201ENST00000623016 728 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AL137003.2-201ENST00000606924 2538 ntBASIC1.23□□□□□ -2.21
COL6A6A6NMZ7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MTCO1P23-201ENST00000415223 1526 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 TMEM167AP1-201ENST00000423409 219 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MTCYBP32-201ENST00000427945 1084 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MTCO1P3-201ENST00000429327 192 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL445305.1-201ENST00000432577 575 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MTND2P20-201ENST00000440805 661 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SEPT14P24-201ENST00000447236 180 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL589880.1-201ENST00000448271 287 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL031313.1-201ENST00000448435 256 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MRPL42P6-201ENST00000486397 371 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RNU6-202P-201ENST00000515998 96 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RNU1-61P-201ENST00000516107 151 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms