Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR1289-2-201ENST00000408360 111 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 RNU2-64P-201ENST00000411315 191 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AL591043.1-201ENST00000432461 424 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 BMI1P1-201ENST00000445879 941 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC005908.1-201ENST00000468701 347 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 COX6CP14-201ENST00000469580 174 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 RNA5SP112-201ENST00000515937 99 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC093510.2-201ENST00000562820 896 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 MIR4661-201ENST00000582720 75 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC069294.1-201ENST00000608397 350 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 AC099842.1-201ENST00000619919 596 ntBASIC0.4□□□□□ -2.35
LINC01549A6NIU2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RNU1-124P-201ENST00000363861 145 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RNU6-1080P-201ENST00000383982 107 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RPL7P34-201ENST00000433316 712 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC112492.4-201ENST00000456549 352 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RNU6-420P-201ENST00000458780 107 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RNA5SP57-201ENST00000459463 123 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC145146.1-201ENST00000496370 254 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 SUMO2P6-201ENST00000505273 288 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 RAB11AP2-201ENST00000545905 639 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC012443.1-201ENST00000605605 231 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC138473.1-201ENST00000605717 526 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AC116312.1-201ENST00000606841 314 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 AL121890.5-201ENST00000620848 304 ntBASIC0.39□□□□□ -2.35
LINC01549A6NIU2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LINC01549A6NIU2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 NSRP1P1-201ENST00000444067 1693 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 RNA5SP327-201ENST00000362494 101 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 Y_RNA.111-201ENST00000363248 100 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 RNU6-26P-201ENST00000383985 107 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 MTCYBP29-201ENST00000436327 1006 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 RPS20P20-201ENST00000460498 340 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AC098848.2-201ENST00000588023 330 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 BNIP3P10-201ENST00000605360 577 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 AC093838.1-201ENST00000613014 469 ntBASIC0.38□□□□□ -2.35
LINC01549A6NIU2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
LINC01549A6NIU2 MTND4P16-201ENST00000466108 1367 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 RNU6-1035P-201ENST00000384477 107 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 AL117342.1-201ENST00000404861 406 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 OOSP1P1-201ENST00000423265 274 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 RPL27AP8-201ENST00000424277 446 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 SNRPFP4-201ENST00000456366 242 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 RPL31P3-201ENST00000458430 332 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.37□□□□□ -2.35
LINC01549A6NIU2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.37□□□□□ -2.35
LINC01549A6NIU2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.37□□□□□ -2.35
LINC01549A6NIU2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.37□□□□□ -2.35
LINC01549A6NIU2 AC009977.1-201ENST00000586015 570 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.37□□□□□ -2.35
LINC01549A6NIU2 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
LINC01549A6NIU2 ZNF680P1-201ENST00000436625 1469 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 RNU6-1243P-201ENST00000364028 107 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 MIR518D-201ENST00000385014 87 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 RNU2-36P-201ENST00000410361 191 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AL136133.1-201ENST00000413694 376 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC099677.1-201ENST00000420575 175 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC017099.1-201ENST00000448261 1028 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 SNORA48.11-201ENST00000517015 89 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC136628.3-201ENST00000521868 290 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 COX6B1P6-201ENST00000522347 255 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC005832.3-201ENST00000537929 631 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AL021879.1-201ENST00000611756 288 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.36□□□□□ -2.35
LINC01549A6NIU2 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.36□□□□□ -2.35
LINC01549A6NIU2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 RNU6-697P-201ENST00000363348 107 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms