Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL121652.1-201ENST00000608851 448 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC104763.3-201ENST00000613765 618 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR6715A-201ENST00000615929 79 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL157770.1-201ENST00000623049 439 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR1322-201ENST00000638013 71 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MTCO1P9-201ENST00000505577 1534 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 Y_RNA.25-201ENST00000362528 102 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU6-778P-201ENST00000363269 103 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU4-42P-201ENST00000364738 142 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC068050.1-201ENST00000394891 380 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 DHFRP6-201ENST00000401776 268 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL23AP39-201ENST00000415533 405 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AL451054.2-201ENST00000420896 202 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC092427.1-201ENST00000439177 601 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 MOB1AP2-201ENST00000446060 614 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL23AP3-201ENST00000453844 468 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 HMGB1P36-201ENST00000487709 576 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL9P6-201ENST00000492764 598 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORD19.2-201ENST00000516978 73 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 CBX3P7-201ENST00000532876 502 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC00557-201ENST00000563184 1279 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC105245.1-201ENST00000581934 244 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC090330.1-201ENST00000588646 764 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC068276.1-201ENST00000605793 379 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AL138478.1-201ENST00000612252 832 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 AC024257.5-201ENST00000612739 531 ntBASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV1-1A0A0B4J248 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU6-359P-201ENST00000365466 108 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 RNU6-1140P-201ENST00000410517 106 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC007098.1-201ENST00000420122 367 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 BX276092.3-201ENST00000424182 230 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AL158053.1-201ENST00000441503 453 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 MTND2P30-201ENST00000456663 382 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 snoU109.1-201ENST00000459339 135 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC008379.1-201ENST00000463655 464 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC092902.1-201ENST00000486999 259 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC106872.3-201ENST00000495104 446 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 RPS29P11-201ENST00000496507 171 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 NACAP3-201ENST00000552100 481 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC044913.1-201ENST00000557200 430 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 CYCSP2-201ENST00000558168 301 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AL731537.2-201ENST00000561565 951 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC138915.2-201ENST00000569776 97 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR4529-201ENST00000578110 78 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 NRBF2P1-201ENST00000587407 859 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC106052.1-201ENST00000608029 497 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AP002791.1-201ENST00000623291 381 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 MTND5P30-201ENST00000452896 1731 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AL138713.1-201ENST00000624026 2130 ntBASIC1.28□□□□□ -2.2
TRAV1-1A0A0B4J248 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL356473.1-201ENST00000406203 1408 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 SNORA23-201ENST00000365128 182 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL079342.1-201ENST00000401460 267 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 RN7SKP158-201ENST00000410453 326 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL139421.1-201ENST00000423010 169 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 SNRPEP9-201ENST00000436794 238 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AL353689.1-201ENST00000438895 199 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC008837.1-201ENST00000511513 412 ntBASIC1.27□□□□□ -2.21
TRAV1-1A0A0B4J248 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms