Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
PTCH2Q9Y6C5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCH2Q9Y6C5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCH2Q9Y6C5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 Y_RNA.167-201ENST00000363735 109 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 Y_RNA.245-201ENST00000364493 95 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RNU6-831P-201ENST00000384548 107 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AL669831.1-202ENST00000428504 417 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC007919.1-201ENST00000429380 217 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 GTF2IP13-201ENST00000438487 386 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RNU7-66P-201ENST00000459469 62 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RPL21P93-201ENST00000480465 489 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 SNORA19.2-201ENST00000516013 114 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RNA5SP290-201ENST00000517133 127 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RNU6-1315P-201ENST00000517187 99 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC090115.3-201ENST00000553218 849 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 SCOCP1-201ENST00000554676 349 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 MIR5187-201ENST00000583479 76 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 MIR548AC-201ENST00000585049 88 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AL132765.2-201ENST00000610812 351 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AL713922.2-201ENST00000619384 716 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 Z99571.1-201ENST00000636677 394 ntBASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
PTCH2Q9Y6C5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 RNU4-73P-201ENST00000363164 141 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 DEFB109C-201ENST00000382575 264 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 DEFB109B-201ENST00000382656 264 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 RNU6-45P-201ENST00000384471 107 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 RPLP0P7-201ENST00000416050 667 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 RPS6P12-201ENST00000432491 726 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 MTCO1P29-201ENST00000496868 288 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 AC007687.1-201ENST00000602704 304 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 CTHRC1P1-201ENST00000605383 469 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 AC103710.3-201ENST00000608157 948 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 MIR8058-201ENST00000615737 89 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 MIR7702-201ENST00000621931 59 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 MTND1P37-201ENST00000636562 264 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 AL049781.1-201ENST00000623195 3585 ntBASIC4.42□□□□□ -1.7
PTCH2Q9Y6C5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC063979.1-201ENST00000415539 377 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 GPM6BP2-201ENST00000432046 144 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 HMGB1P12-201ENST00000438594 598 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 GPM6BP1-201ENST00000446387 144 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 UBE2DNL-203ENST00000474922 222 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 RNU6-864P-201ENST00000516256 108 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 Y_RNA.675-201ENST00000516389 149 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 TRAV28-201ENST00000557548 323 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC026464.5-201ENST00000562497 722 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AL137843.1-201ENST00000605078 385 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTCH2Q9Y6C5 AC007785.2-201ENST00000598627 1916 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms