Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 RNU4-55P-201ENST00000410731 137 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AL137014.1-201ENST00000420490 1226 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AL353193.1-201ENST00000421444 268 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AL121601.2-201ENST00000438019 707 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 SNORD121B-201ENST00000458838 81 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC009646.1-201ENST00000510455 318 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC091544.4-201ENST00000555268 342 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 SNORA59B-202ENST00000578183 701 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 DUXAP4-201ENST00000603046 613 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AL590282.1-201ENST00000610379 1136 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 AC096644.4-201ENST00000563417 2912 ntBASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHAC2Q9Y5I4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 Y_RNA.296-201ENST00000364930 108 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RNU6-851P-201ENST00000384565 107 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RPL23AP32-201ENST00000395315 459 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 PIGFP2-201ENST00000421400 651 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC244098.2-201ENST00000422068 99 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC007283.2-201ENST00000424739 197 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC019097.1-201ENST00000424783 735 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RPS20P5-201ENST00000434808 360 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AL662791.1-201ENST00000441992 928 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RAC1P7-201ENST00000445367 377 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC132479.1-201ENST00000449160 144 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC092001.1-201ENST00000453012 261 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC092989.1-201ENST00000481235 277 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC055855.1-201ENST00000489563 579 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RNA5SP217-201ENST00000515959 91 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RNU6-528P-201ENST00000516926 100 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AP001893.2-201ENST00000526949 202 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 ANP32BP3-201ENST00000559213 706 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AL356432.3-201ENST00000568952 465 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 MIR3167-201ENST00000579623 85 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 MIR3682-201ENST00000581338 84 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AL158211.4-201ENST00000606988 584 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 AC009902.3-201ENST00000606235 2172 ntBASIC3.41□□□□□ -1.86
PCDHAC2Q9Y5I4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 ZNF826P-207ENST00000622273 1910 ntBASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 AL079305.1-201ENST00000623159 3008 ntBASIC3.4□□□□□ -1.86
PCDHAC2Q9Y5I4 RNU6-181P-201ENST00000363225 107 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 BEND7P1-201ENST00000422058 457 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AC233728.2-201ENST00000425348 757 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 ARL5AP4-201ENST00000430731 512 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RPL21P112-201ENST00000434403 463 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 ARPC3P1-201ENST00000437218 533 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 HMGB1P31-201ENST00000437242 427 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 FTH1P1-201ENST00000437933 532 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RPS15AP9-201ENST00000439856 381 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RPL23AP41-201ENST00000484754 458 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RNU6-445P-201ENST00000516949 107 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AL133271.1-201ENST00000538229 291 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 SNORD84-203ENST00000584275 78 ntBASIC3.4□□□□□ -1.87
PCDHAC2Q9Y5I4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms