Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 UBE2L2-201ENST00000254302 429 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 SNORD70.1-201ENST00000391007 85 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RN7SKP156-201ENST00000410308 342 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 POLHP1-201ENST00000411806 470 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 USP9YP20-201ENST00000419224 558 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC091286.1-201ENST00000431233 461 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RPS15AP27-201ENST00000449183 343 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AL160314.1-201ENST00000490836 438 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 CCDC34P1-201ENST00000507441 517 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 FGF7P4-201ENST00000509595 295 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RNU7-30P-201ENST00000516835 62 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RNA5SP291-201ENST00000517222 105 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AL118558.2-201ENST00000556294 238 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 MIR3690-201ENST00000580266 75 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 SRGNP1-201ENST00000603392 451 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 MIR15A-201ENST00000607334 83 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 Z82243.1-201ENST00000609432 473 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 U2.17-201ENST00000611454 95 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 FP236240.3-201ENST00000623061 327 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 AC009093.8-201ENST00000641769 292 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 ZNF285B-201ENST00000561698 1767 ntBASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PCDHB1Q9Y5F3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB1Q9Y5F3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB1Q9Y5F3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.78
PCDHB1Q9Y5F3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB1Q9Y5F3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 MIR301A-201ENST00000385261 86 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP129-201ENST00000410276 118 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA57.3-201ENST00000411095 141 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-329P-201ENST00000459618 107 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 VN1R17P-201ENST00000472048 1090 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 MTCO3P9-201ENST00000506989 781 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC079140.5-201ENST00000507882 310 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 TTC39CP1-201ENST00000512513 755 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC112206.3-201ENST00000514578 389 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU4-49P-201ENST00000516080 140 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-189P-201ENST00000516120 101 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU2-58P-201ENST00000516403 183 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-914P-201ENST00000516749 109 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC011611.1-201ENST00000552179 197 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 MIR5692A1-201ENST00000580523 69 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 MIR5583-1-201ENST00000580941 59 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC243960.4-201ENST00000600532 288 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC005034.5-201ENST00000604219 466 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC007179.3-201ENST00000604976 235 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC091167.4-201ENST00000605079 184 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AL050343.2-201ENST00000607338 280 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AL132765.2-201ENST00000610812 351 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 AC103705.1-201ENST00000619013 241 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PCDHB1Q9Y5F3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms