Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC006028.1-201ENST00000438379 402 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AL137159.1-201ENST00000452808 512 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 RPL23AP41-201ENST00000484754 458 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC023194.1-201ENST00000493084 308 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 GTF2IP9-201ENST00000502460 301 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 BNIP3P25-201ENST00000596023 559 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC112220.2-201ENST00000605513 533 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC096772.1-201ENST00000609146 564 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC093673.2-201ENST00000609674 331 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC092574.1-201ENST00000609771 420 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AL133445.2-201ENST00000611191 527 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC084824.5-201ENST00000612009 413 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AC006133.1-201ENST00000617106 264 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 MIR3651-201ENST00000630427 90 ntBASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHTOPQ9Y3Y2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 MIR490-201ENST00000384865 128 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA40.2-201ENST00000390847 128 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 MTCO1P17-201ENST00000411522 491 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC019097.1-201ENST00000424783 735 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 BTF3P15-201ENST00000455606 336 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 SLC25A15P5-201ENST00000508033 253 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC093752.1-206ENST00000511823 336 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 SCGB1D5P-201ENST00000515134 247 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC007458.1-201ENST00000542812 373 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 MIR3158-1-201ENST00000583596 81 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 MIR4635-201ENST00000583759 79 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC068790.3-201ENST00000602988 553 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AL713866.2-201ENST00000603579 219 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 RPL21P136-201ENST00000605378 396 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC090970.3-201ENST00000612566 866 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC084757.4-201ENST00000616350 526 ntBASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHTOPQ9Y3Y2 AC096644.4-201ENST00000563417 2912 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 RNU1-33P-201ENST00000364249 162 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 PTMAP2-201ENST00000397627 327 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AL139397.2-201ENST00000404529 772 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 MIR320C1-201ENST00000408566 88 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC022018.1-201ENST00000430685 241 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 FCF1P1-201ENST00000432690 571 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 RPS24P13-201ENST00000442520 397 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 BRK1P2-201ENST00000442875 223 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA67.7-201ENST00000516664 135 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC026403.1-201ENST00000518938 295 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 UBTFL10-201ENST00000528532 562 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 NDUFA5P6-201ENST00000542110 379 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 HSBP1P1-201ENST00000555205 166 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 BNIP3P26-201ENST00000600827 554 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AL670379.10-201ENST00000604330 253 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AL670379.9-201ENST00000605428 253 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 LINC02211-204ENST00000642024 1070 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 AC009487.4-201ENST00000624969 3585 ntBASIC1.87□□□□□ -2.11
CHTOPQ9Y3Y2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 AC080100.1-201ENST00000624239 5356 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 RNU4-51P-201ENST00000364206 140 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 U8.8-201ENST00000365399 135 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
CHTOPQ9Y3Y2 MIR670-201ENST00000390142 98 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms