Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC006028.1-201ENST00000438379 402 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AL161651.1-201ENST00000440882 223 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 BRK1P2-201ENST00000442875 223 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 NANOGNBP1-201ENST00000448444 480 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC074250.1-201ENST00000511117 192 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC118465.1-201ENST00000513820 1271 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 RNU6-572P-201ENST00000516724 80 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 RNU6-1315P-201ENST00000517187 99 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 RNA5SP380-201ENST00000517190 98 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
FOXA2Q9Y261 HSPE1P20-201ENST00000538133 289 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.57□□□□□ -2
FOXA2Q9Y261 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.57□□□□□ -2
FOXA2Q9Y261 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.57□□□□□ -2
FOXA2Q9Y261 MIR3682-201ENST00000581338 84 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC005771.1-201ENST00000585581 349 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC005261.5-201ENST00000596280 355 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.57□□□□□ -2
FOXA2Q9Y261 SRGNP1-201ENST00000603392 451 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AL158032.1-201ENST00000605401 106 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 AC069200.1-201ENST00000609511 323 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
FOXA2Q9Y261 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
FOXA2Q9Y261 MTND5P1-201ENST00000445440 1375 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXA2Q9Y261 AC004944.1-201ENST00000517807 3059 ntBASIC2.57□□□□□ -2
FOXA2Q9Y261 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FOXA2Q9Y261 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
FOXA2Q9Y261 RNY4P34-201ENST00000364779 95 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RNA5SP267-201ENST00000364893 126 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
FOXA2Q9Y261 RNU6-641P-201ENST00000384006 107 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RNU6-1083P-201ENST00000384022 107 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RNU6-39P-201ENST00000384344 107 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 Y_RNA.534-201ENST00000384599 112 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 SNORA40.3-201ENST00000390964 122 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RPS3AP36-201ENST00000398190 775 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL356057.2-201ENST00000403318 432 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 RNU2-25P-201ENST00000411041 191 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 HMGN1P14-201ENST00000412459 517 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 USP9YP6-201ENST00000413550 854 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.56□□□□□ -2
FOXA2Q9Y261 AC007560.1-201ENST00000426912 237 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.56□□□□□ -2
FOXA2Q9Y261 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.56□□□□□ -2
FOXA2Q9Y261 OR2B8P-201ENST00000432841 938 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.56□□□□□ -2
FOXA2Q9Y261 RPS12P18-201ENST00000442381 270 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 MTND6P13-201ENST00000443510 523 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 ELOCP23-201ENST00000452014 332 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 NIPA2P5-201ENST00000452282 464 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 SNRPGP9-201ENST00000456025 225 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 snoU109.1-201ENST00000459339 135 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 MTCO2P6-201ENST00000463134 685 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.56□□□□□ -2
FOXA2Q9Y261 MTND3P7-201ENST00000474435 343 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.56□□□□□ -2
FOXA2Q9Y261 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
FOXA2Q9Y261 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.56□□□□□ -2
FOXA2Q9Y261 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AC078899.3-201ENST00000599065 212 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL391813.1-201ENST00000603098 260 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AC068276.1-201ENST00000605793 379 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 AC135507.1-201ENST00000607214 561 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 MIR15A-201ENST00000607334 83 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 uc_338.25-201ENST00000613756 156 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AL359547.2-201ENST00000615810 418 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 PISRT1-201ENST00000626175 531 ntBASIC2.56□□□□□ -2
FOXA2Q9Y261 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.56□□□□□ -2
FOXA2Q9Y261 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
FOXA2Q9Y261 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
FOXA2Q9Y261 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
FOXA2Q9Y261 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.55□□□□□ -2
FOXA2Q9Y261 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.55□□□□□ -2
FOXA2Q9Y261 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
FOXA2Q9Y261 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXA2Q9Y261 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
FOXA2Q9Y261 RNU4-21P-201ENST00000362802 126 ntBASIC2.55□□□□□ -2
FOXA2Q9Y261 SNORA4.3-201ENST00000365564 137 ntBASIC2.55□□□□□ -2
FOXA2Q9Y261 RNY3P10-201ENST00000384764 102 ntBASIC2.55□□□□□ -2
FOXA2Q9Y261 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
FOXA2Q9Y261 RNU2-39P-201ENST00000410604 198 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms