Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNORA59B-202ENST00000578183 701 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL391646.1-201ENST00000603860 190 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL136363.1-201ENST00000605349 337 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC103710.2-201ENST00000609912 942 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 TUG1_2.1-201ENST00000614234 87 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 SNORA50A-202ENST00000629536 136 ntBASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDK11AQ9UQ88 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 CR848007.1-201ENST00000442354 1699 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RNU5A-1-201ENST00000362698 116 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RNU6-1120P-201ENST00000362988 108 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RNU5E-8P-201ENST00000363502 116 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC126124.2-201ENST00000413542 321 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RPL21P24-201ENST00000413752 448 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 MTND1P23-201ENST00000416931 372 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 MTATP6P18-201ENST00000417994 673 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC090774.1-201ENST00000435925 246 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RPS4XP2-201ENST00000458402 793 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 SNORD97-201ENST00000459187 142 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC004801.2-202ENST00000463559 283 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RNU7-51P-201ENST00000516560 62 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 RNU6-1231P-201ENST00000517185 103 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC100870.1-201ENST00000522035 505 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 IGHV3-76-201ENST00000522465 295 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 OR5AQ1P-201ENST00000527596 927 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC022080.3-201ENST00000544433 482 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC125611.2-201ENST00000551907 647 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AL359212.1-201ENST00000556608 614 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC098848.2-201ENST00000588023 330 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC099778.2-201ENST00000610904 211 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 AC139792.3-201ENST00000623525 224 ntBASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK11AQ9UQ88 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 RNU1-70P-201ENST00000362618 164 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 RNU6-1284P-201ENST00000363701 100 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.248-201ENST00000364501 109 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 RNU6-7-201ENST00000364784 107 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 RNU6-8-201ENST00000365467 107 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.450-201ENST00000384198 113 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 SNORD115-47-201ENST00000391226 86 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC002075.2-201ENST00000425207 252 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 ARL4AP2-201ENST00000507378 601 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 OR4R1P-201ENST00000529879 463 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AL157687.1-201ENST00000554853 619 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 MIR2682-201ENST00000580305 110 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AL136313.1-201ENST00000624804 202 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC005609.4-201ENST00000625071 447 ntBASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK11AQ9UQ88 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 SDAD1P2-201ENST00000441308 2028 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.402-201ENST00000383972 102 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 Y_RNA.573-201ENST00000384763 105 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AL356867.1-201ENST00000429623 299 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 MTCO3P45-201ENST00000443036 613 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC008481.1-201ENST00000463278 396 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AL121769.1-201ENST00000469473 401 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 HSPE1P6-201ENST00000479457 291 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC107934.2-201ENST00000518653 310 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC123904.3-201ENST00000547218 814 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AL512360.1-201ENST00000555346 234 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AL133241.1-201ENST00000556832 487 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 GLUD1P4-201ENST00000590914 418 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 Z84480.1-201ENST00000605131 311 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 AC004067.1-201ENST00000608733 700 ntBASIC5.04□□□□□ -1.6
CDK11AQ9UQ88 uc_338.1-201ENST00000612113 180 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms