Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC133134.1-201ENST00000466800 359 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 TTC39CP1-201ENST00000512513 755 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC114797.1-201ENST00000514003 728 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC243972.3-201ENST00000539655 198 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC015712.3-201ENST00000559380 164 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC109446.2-201ENST00000567872 497 ntBASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM4Q9ULL8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 AC244035.1-201ENST00000430042 390 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 USP9YP12-201ENST00000450481 570 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 AL031183.1-201ENST00000457667 207 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 GLUD1P4-201ENST00000590914 418 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 MTND1P37-201ENST00000636562 264 ntBASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM4Q9ULL8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 Y_RNA.238-201ENST00000364441 102 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 MT-TH-201ENST00000387441 69 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 RNU4-53P-201ENST00000410828 140 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AL512844.2-201ENST00000433990 593 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 SNRPFP4-201ENST00000456366 242 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 MTND3P7-201ENST00000474435 343 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AC109486.1-201ENST00000486833 374 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AL160314.1-201ENST00000490836 438 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 MTND5P13-201ENST00000513046 1079 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 TRAV28-201ENST00000557548 323 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 MIR1273D-201ENST00000577266 86 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AL031775.1-201ENST00000607014 887 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AL161629.2-201ENST00000615347 275 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 AC009487.2-201ENST00000420969 6821 ntBASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SHROOM4Q9ULL8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AC016717.2-201ENST00000609089 5141 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 MIR26A1-201ENST00000362205 77 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 Z85995.1-201ENST00000415547 335 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AL356583.2-201ENST00000426536 280 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 CACYBPP2-201ENST00000453625 678 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 RPL7P20-201ENST00000520308 745 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AC022616.6-201ENST00000520479 119 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AP002748.2-201ENST00000528671 348 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 DNAJC8P1-201ENST00000554535 372 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 MIR3118-1-201ENST00000581787 76 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AC009977.1-201ENST00000586015 570 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 WWP1P1-201ENST00000466609 2769 ntBASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SHROOM4Q9ULL8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC012498.1-201ENST00000424037 437 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 ISCA1P6-201ENST00000427740 390 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC007919.1-201ENST00000429380 217 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC020550.1-201ENST00000447385 163 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 SNRPGP6-201ENST00000451124 220 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 RNA5SP458-201ENST00000516188 119 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC128657.1-201ENST00000549459 145 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 ZNF519P3-201ENST00000557158 1032 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC068057.2-201ENST00000624047 895 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AC092104.1-201ENST00000497346 1441 ntBASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHROOM4Q9ULL8 RNU6-1035P-201ENST00000384477 107 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 RNU4-26P-201ENST00000410270 107 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 AC137499.1-201ENST00000427602 88 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 PIGFP3-201ENST00000441918 722 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 GAPDHP27-201ENST00000447427 1020 ntBASIC5□□□□□ -1.61
SHROOM4Q9ULL8 snoU13.28-201ENST00000459235 104 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms