Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AP005902.1-201ENST00000521358 186 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AC092474.3-201ENST00000603022 568 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AC103810.8-201ENST00000607347 118 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AC007038.2-201ENST00000608095 740 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AC007742.2-201ENST00000618226 398 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SCN11AQ9UI33 ZNF37BP-203ENST00000452306 1352 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 Y_RNA.458-201ENST00000384240 102 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 MIR934-201ENST00000401241 83 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 SFR1P2-201ENST00000421841 730 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 AC004941.2-201ENST00000427009 228 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 Z77249.1-201ENST00000444622 1175 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 LINC00933-203ENST00000559812 219 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 AC090970.3-201ENST00000612566 866 ntBASIC1.14□□□□□ -2.23
SCN11AQ9UI33 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN11AQ9UI33 MIR936-201ENST00000401264 98 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 Z86062.1-201ENST00000406773 777 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AL355810.1-201ENST00000614629 552 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC091925.1-201ENST00000623204 462 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 MTCYBP24-201ENST00000420387 1106 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AL645638.1-201ENST00000440519 361 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC117503.1-201ENST00000472241 394 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC093770.1-201ENST00000511559 571 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 FAM60BP-201ENST00000578364 658 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 PRR13P7-201ENST00000605538 430 ntBASIC1.13□□□□□ -2.23
SCN11AQ9UI33 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SCN11AQ9UI33 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 UBE2V1P9-201ENST00000414760 368 ntBASIC1.12□□□□□ -2.23
SCN11AQ9UI33 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 AC027575.1-201ENST00000481064 460 ntBASIC1.12□□□□□ -2.23
SCN11AQ9UI33 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 OR5AL2P-201ENST00000532185 920 ntBASIC1.12□□□□□ -2.23
SCN11AQ9UI33 CYCSP2-201ENST00000558168 301 ntBASIC1.12□□□□□ -2.23
SCN11AQ9UI33 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCN11AQ9UI33 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 MIR767-201ENST00000390228 109 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AL356131.1-201ENST00000405826 414 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 RPS3AP24-201ENST00000407896 734 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 FCF1P2-201ENST00000415284 583 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 TMEM167AP1-201ENST00000423409 219 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 RPL23AP6-201ENST00000446637 472 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AC108157.1-201ENST00000510511 539 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 MIR4299-201ENST00000577899 72 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AC079395.3-201ENST00000615161 484 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AC008555.8-201ENST00000623602 2168 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 RNU6-492P-201ENST00000363035 104 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 RNU6-17P-201ENST00000384245 107 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 RNU6-18P-201ENST00000384527 107 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 HMGB3P31-201ENST00000413333 595 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AL591704.1-201ENST00000432574 275 ntBASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN11AQ9UI33 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCN11AQ9UI33 U3.20-201ENST00000390909 217 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 SEPT2P1-201ENST00000419651 180 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 CR848007.2-201ENST00000424918 787 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 CBX3P6-201ENST00000430257 527 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 Z80107.1-201ENST00000436830 412 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN11AQ9UI33 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.1□□□□□ -2.23
SCN11AQ9UI33 PRELID3BP4-201ENST00000515476 571 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AC018630.2-201ENST00000534866 2403 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AL512605.2-201ENST00000592972 256 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 AL450336.1-201ENST00000605180 586 ntBASIC1.1□□□□□ -2.23
SCN11AQ9UI33 TEX21P-201ENST00000447107 1476 ntBASIC1.09□□□□□ -2.23
SCN11AQ9UI33 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SCN11AQ9UI33 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.09□□□□□ -2.23
SCN11AQ9UI33 AC244636.1-201ENST00000421152 228 ntBASIC1.09□□□□□ -2.23
SCN11AQ9UI33 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.09□□□□□ -2.23
SCN11AQ9UI33 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.09□□□□□ -2.23
SCN11AQ9UI33 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.09□□□□□ -2.23
SCN11AQ9UI33 AL391834.1-201ENST00000609609 560 ntBASIC1.09□□□□□ -2.23
SCN11AQ9UI33 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.09□□□□□ -2.24
SCN11AQ9UI33 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.08□□□□□ -2.24
SCN11AQ9UI33 Y_RNA.433-201ENST00000384089 102 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
SCN11AQ9UI33 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms