Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC093534.1-201ENST00000504977 132 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL133153.1-201ENST00000557756 303 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC005951.2-201ENST00000576282 495 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC105224.1-201ENST00000587055 421 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC068790.3-201ENST00000602988 553 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AL590229.1-201ENST00000603497 542 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 Z94722.1-201ENST00000604328 474 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC007038.2-201ENST00000608095 740 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 CR381653.2-201ENST00000624041 768 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 ELL2P3-201ENST00000457883 1602 ntBASIC2.56□□□□□ -2
APOBEC3BQ9UH17 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBEC3BQ9UH17 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RNU5A-1-201ENST00000362698 116 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 SNORA23-201ENST00000365128 182 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RNU6-754P-201ENST00000391166 107 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 MTND1P21-201ENST00000412991 285 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RPL17P12-201ENST00000413391 526 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC129850.1-201ENST00000436203 508 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 SNRPGP9-201ENST00000456025 225 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RPL31P60-201ENST00000478450 367 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 HSPE1P6-201ENST00000479457 291 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RPS15AP34-201ENST00000487776 387 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 RPS15AP36-201ENST00000492022 382 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC117532.1-201ENST00000514638 323 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC005832.2-201ENST00000538921 1430 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL356432.3-201ENST00000568952 465 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL136363.1-201ENST00000605349 337 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC009159.1-201ENST00000618386 642 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AL138713.1-201ENST00000624026 2130 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC131280.1-202ENST00000624067 4211 ntBASIC2.55□□□□□ -2
APOBEC3BQ9UH17 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
APOBEC3BQ9UH17 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 OR4G2P-202ENST00000641004 1759 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 ZNF519P1-201ENST00000449011 1626 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 MTND4P4-201ENST00000439033 1366 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 SNORA36C-201ENST00000384289 132 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 SNORD116-1-201ENST00000384335 95 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 USP9YP12-201ENST00000450481 570 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC116337.2-201ENST00000477662 156 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC091965.2-201ENST00000512324 613 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 RNA5SP76-201ENST00000516277 87 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC022616.6-201ENST00000520479 119 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC100870.1-201ENST00000522035 505 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AP000867.2-201ENST00000532468 320 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AP005136.1-201ENST00000579765 429 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AL136313.1-201ENST00000624804 202 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
APOBEC3BQ9UH17 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.54□□□□□ -2
APOBEC3BQ9UH17 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 DDX10P1-201ENST00000448545 1933 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
APOBEC3BQ9UH17 DEFB108F-201ENST00000344638 222 ntBASIC2.53□□□□□ -2
APOBEC3BQ9UH17 RNY4P24-201ENST00000362735 96 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms