Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC135001.1-201ENST00000544546 283 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC012493.2-201ENST00000595083 291 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC107294.1-201ENST00000609524 467 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC012409.4-201ENST00000612923 249 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 MIR8057-201ENST00000620957 69 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 AC024940.5-201ENST00000622889 474 ntBASIC3.83□□□□□ -1.8
COL20A1Q9P218 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
COL20A1Q9P218 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL20A1Q9P218 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL20A1Q9P218 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 RNU6-14P-201ENST00000384630 106 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 RNU4-46P-201ENST00000410818 138 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 USP9YP6-201ENST00000413550 854 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 OR6C66P-201ENST00000414917 930 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 MTCYBP8-201ENST00000422855 651 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 CYCSP32-201ENST00000440548 321 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL357552.1-201ENST00000445254 415 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 CBWD4P-201ENST00000445695 655 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 TRBV1-201ENST00000476502 284 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 MIR4738-201ENST00000579134 87 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AC006557.5-201ENST00000603126 811 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL162713.1-201ENST00000604480 262 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL158032.1-201ENST00000605401 106 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 AL020991.1-201ENST00000612314 373 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 MIR3662-201ENST00000637030 95 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 Z83843.1-201ENST00000604070 3685 ntBASIC3.82□□□□□ -1.8
COL20A1Q9P218 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL20A1Q9P218 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL20A1Q9P218 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
COL20A1Q9P218 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL513302.2-201ENST00000562313 1842 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC090740.1-201ENST00000623193 2262 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL139276.1-201ENST00000311910 1001 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 NACAP2-201ENST00000318548 624 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 RNU1-70P-201ENST00000362618 164 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL136116.1-201ENST00000403591 381 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL354719.1-201ENST00000406535 843 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 RNU6-373P-201ENST00000411247 98 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC080125.1-201ENST00000414888 684 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL139413.1-201ENST00000421309 217 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL591212.2-201ENST00000433923 257 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC009237.8-201ENST00000445492 379 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 SNRPFP3-201ENST00000457792 225 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 RPS4XP2-201ENST00000458402 793 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 RPL39P36-201ENST00000490784 156 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 Y_RNA.689-201ENST00000516589 107 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 NARSP2-201ENST00000518524 679 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC118273.2-201ENST00000532092 465 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 MIR5680-201ENST00000577577 84 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 BNIP3P30-201ENST00000601184 574 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 AL138889.2-201ENST00000603883 242 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL20A1Q9P218 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL20A1Q9P218 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
COL20A1Q9P218 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL20A1Q9P218 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL20A1Q9P218 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL20A1Q9P218 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COL20A1Q9P218 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL20A1Q9P218 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL20A1Q9P218 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms