Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU6-270P-201ENST00000364131 105 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 SNORD115-7-201ENST00000365306 82 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC080125.1-201ENST00000414888 684 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RPS24P13-201ENST00000442520 397 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL031183.1-201ENST00000457667 207 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL162395.1-201ENST00000457882 422 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RNU7-63P-201ENST00000459054 62 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 RPL7P49-201ENST00000471402 708 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL049830.2-201ENST00000480072 201 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AMZ2P1-203ENST00000565833 850 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC068135.2-201ENST00000569293 1028 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC008521.1-201ENST00000587471 187 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC069200.1-201ENST00000609511 323 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 FTX_3.1-201ENST00000610451 147 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL138880.2-201ENST00000616214 239 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AC068792.1-201ENST00000621354 417 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 AL359880.1-201ENST00000621879 266 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 CR381653.2-201ENST00000624041 768 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 U6.105-201ENST00000637379 88 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 SNORA4.3-201ENST00000365564 137 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNU6-116P-201ENST00000384042 109 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNU6-606P-201ENST00000384721 111 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 MIR183-201ENST00000384958 110 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 SNORD17-201ENST00000390930 237 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNU1-101P-201ENST00000391171 127 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RPS4XP8-201ENST00000402039 771 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 MTCO3P30-201ENST00000426425 670 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RPL7P54-201ENST00000438336 674 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 DPPA3P1-201ENST00000448050 469 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 MTND1P18-201ENST00000448191 573 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 ELOCP23-201ENST00000452014 332 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 FABP5P15-201ENST00000453566 214 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC009646.1-201ENST00000510455 318 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC080078.2-201ENST00000603766 501 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AL161756.2-201ENST00000604597 246 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AL021997.1-201ENST00000605757 193 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AP001596.2-201ENST00000608410 312 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC011155.2-201ENST00000623202 216 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC103710.2-202ENST00000641454 2853 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AC022336.2-201ENST00000568966 2538 ntBASIC3.28□□□□□ -1.88
HCN3Q9P1Z3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HCN3Q9P1Z3 MIR301A-201ENST00000385261 86 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms