Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 SUB1P1-201ENST00000524415 382 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 AC015917.1-201ENST00000579654 510 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 HMGN2P15-201ENST00000585707 270 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 NRBF2P5-201ENST00000603087 788 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 BRDTP1-201ENST00000605735 677 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 Z82243.1-201ENST00000609432 473 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 AC008669.1-201ENST00000565823 2178 ntBASIC4.01□□□□□ -1.77
DDX56Q9NY93 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
DDX56Q9NY93 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX56Q9NY93 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
DDX56Q9NY93 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4□□□□□ -1.77
DDX56Q9NY93 RNU1-18P-201ENST00000363062 164 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RN7SKP280-201ENST00000364196 304 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 Y_RNA.248-201ENST00000364501 109 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RNU6-877P-201ENST00000383868 107 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RNA5SP354-201ENST00000391247 136 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AL592114.1-201ENST00000403842 483 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 ARL5AP1-201ENST00000418991 388 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AC245291.1-201ENST00000419501 328 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 BPY2DP-201ENST00000422208 265 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4□□□□□ -1.77
DDX56Q9NY93 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AC098831.1-201ENST00000440661 216 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4□□□□□ -1.77
DDX56Q9NY93 SCARNA18-201ENST00000459004 134 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RNU7-180P-201ENST00000459240 63 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RPS23P7-201ENST00000466210 444 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4□□□□□ -1.77
DDX56Q9NY93 AC022493.1-201ENST00000492984 337 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AC112206.3-201ENST00000514578 389 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RNA5SP164-201ENST00000516533 110 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4□□□□□ -1.77
DDX56Q9NY93 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4□□□□□ -1.77
DDX56Q9NY93 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
DDX56Q9NY93 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4□□□□□ -1.77
DDX56Q9NY93 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4□□□□□ -1.77
DDX56Q9NY93 AL592436.1-201ENST00000605135 558 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4□□□□□ -1.77
DDX56Q9NY93 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4□□□□□ -1.77
DDX56Q9NY93 MIR3199-2-201ENST00000636243 86 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 MIR3688-2-201ENST00000636963 87 ntBASIC4□□□□□ -1.77
DDX56Q9NY93 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX56Q9NY93 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 ASNSP3-201ENST00000451989 1306 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 Y_RNA.256-201ENST00000364594 104 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 MIR578-201ENST00000384828 96 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 SNORD70.1-201ENST00000391007 85 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 RNU6-908P-201ENST00000410160 94 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 Y_RNA.623-201ENST00000411128 95 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 SNRPEP10-201ENST00000420249 274 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 MRPS10P2-201ENST00000431226 381 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AL627311.1-201ENST00000431514 115 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 MYL8P-204ENST00000431574 518 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 CALM1P1-201ENST00000442082 433 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 HSFY6P-201ENST00000445573 403 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 RNU6-1183P-201ENST00000517054 60 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC022634.1-201ENST00000520765 532 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 RBM11P1-201ENST00000604951 799 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AL591034.3-201ENST00000605511 685 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 AC244205.2-202ENST00000635781 342 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 MIR6830-201ENST00000636015 70 ntBASIC3.99□□□□□ -1.77
DDX56Q9NY93 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX56Q9NY93 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX56Q9NY93 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
DDX56Q9NY93 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
DDX56Q9NY93 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX56Q9NY93 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX56Q9NY93 AC091564.4-201ENST00000533934 2194 ntBASIC3.98□□□□□ -1.77
DDX56Q9NY93 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX56Q9NY93 RNU6-1127P-201ENST00000384580 107 ntBASIC3.98□□□□□ -1.77
DDX56Q9NY93 MIR34A-201ENST00000385130 110 ntBASIC3.98□□□□□ -1.77
DDX56Q9NY93 MIR767-201ENST00000390228 109 ntBASIC3.98□□□□□ -1.77
DDX56Q9NY93 MIR1277-201ENST00000408536 78 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms