Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 DDX10P1-201ENST00000448545 1933 ntBASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PDLIM7Q9NR12 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU6-328P-201ENST00000390887 106 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1050P-201ENST00000410388 107 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU4-78P-201ENST00000410940 126 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 HMGB3P2-201ENST00000411913 584 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC114482.1-201ENST00000418010 247 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU7-167P-201ENST00000459160 62 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RPS26P28-201ENST00000470806 348 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC026782.1-201ENST00000512952 449 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1332P-201ENST00000516666 104 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 RNU7-143P-201ENST00000516781 65 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC103783.1-201ENST00000520506 373 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 SNORD84-203ENST00000584275 78 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 MIR4298-201ENST00000584380 73 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 MIR5684-201ENST00000585074 65 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 AC006254.3-201ENST00000603353 884 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 Z69720.2-201ENST00000624755 279 ntBASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM7Q9NR12 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.252-201ENST00000364556 101 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RNU6-715P-201ENST00000365204 103 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.404-201ENST00000383978 102 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RNY1P14-201ENST00000384426 108 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AL583834.1-201ENST00000406943 343 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RPL21P109-201ENST00000422213 475 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RPL7P37-201ENST00000425095 738 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 HMGN2P31-201ENST00000432430 273 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 SNORA59A-201ENST00000459326 152 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC117503.1-201ENST00000472241 394 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 HMGB1P30-201ENST00000492455 606 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RNU2-69P-201ENST00000516061 100 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.670-201ENST00000516255 105 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 Vault.1-201ENST00000516474 102 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.708-201ENST00000516950 96 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 RNU6-794P-201ENST00000517261 64 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 MTCO3P23-201ENST00000561363 289 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AL034351.1-201ENST00000605288 668 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 AC007792.1-201ENST00000623023 402 ntBASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.52□□□□□ -1.69
PDLIM7Q9NR12 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AL137003.2-201ENST00000606924 2538 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC139713.2-215ENST00000641428 5037 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MAPK10-372ENST00000641954 3413 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-263P-201ENST00000363811 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-128P-201ENST00000383976 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-26P-201ENST00000383985 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 RNU6-434P-201ENST00000384376 107 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MIR183-201ENST00000384958 110 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MT-TR-201ENST00000387439 65 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AL139039.1-201ENST00000401900 692 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 NDUFS5P1-201ENST00000405668 289 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MIR1302-3-201ENST00000408128 138 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 Y_RNA.594-201ENST00000410373 140 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AC244098.2-201ENST00000422068 99 ntBASIC4.51□□□□□ -1.69
PDLIM7Q9NR12 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms