Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SCARNA10-201ENST00000459255 330 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RN7SL172P-201ENST00000460535 303 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 BX284632.1-201ENST00000478218 541 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 HSPE1P6-201ENST00000479457 291 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 RPS29P30-201ENST00000600975 111 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 RNU6-6P-201ENST00000606623 107 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.53□□□□□ -1.68
SSU72Q9NP77 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSU72Q9NP77 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SSU72Q9NP77 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AL157777.2-201ENST00000258070 137 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 RNU6-212P-201ENST00000362642 104 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 SNORD50.1-201ENST00000362987 71 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 SNORD74.4-201ENST00000364129 80 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 RNU6-933P-201ENST00000384424 107 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 Y_RNA.555-201ENST00000384673 110 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 RNU6-837P-201ENST00000391056 108 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 RNA5SP36-201ENST00000410197 133 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 RNA5SP494-201ENST00000410653 129 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 SNORD56-201ENST00000413522 71 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 MTCO1P39-201ENST00000426148 480 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC091390.3-201ENST00000426478 338 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC133134.1-201ENST00000466800 359 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 COPS8P2-201ENST00000473228 627 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 IGLV2-34-201ENST00000490007 283 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC021006.3-201ENST00000530771 192 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AL121603.1-201ENST00000553815 142 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC073410.2-201ENST00000603240 332 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AL139395.1-201ENST00000603662 160 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 U73479.1-201ENST00000618062 168 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSU72Q9NP77 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
SSU72Q9NP77 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 snoU2_19.2-201ENST00000363024 80 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 RNA5SP242-201ENST00000364171 118 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 Y_RNA.458-201ENST00000384240 102 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 SNORD58.1-201ENST00000391313 66 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 SDHCP2-201ENST00000398565 501 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 MIR548M-201ENST00000408260 86 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 PIGPP3-201ENST00000425307 415 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AL132765.1-201ENST00000434165 553 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC004383.1-201ENST00000438135 289 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC084851.1-201ENST00000529105 249 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AMZ2P1-203ENST00000565833 850 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC022968.1-201ENST00000567372 442 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC130289.1-201ENST00000577321 73 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 AL161798.1-201ENST00000604630 131 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 AC012603.1-201ENST00000606424 528 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 MIR6778-201ENST00000617912 73 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 FTX_2.1-201ENST00000618816 94 ntBASIC4.51□□□□□ -1.69
SSU72Q9NP77 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.51□□□□□ -1.69
SSU72Q9NP77 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSU72Q9NP77 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms