Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AGGF1P5-201ENST00000567900 919 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 RPS15AP11-201ENST00000594193 385 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AL158042.1-201ENST00000605338 460 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AC007349.4-201ENST00000608114 532 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AP000484.1-201ENST00000620067 1252 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AC080100.1-201ENST00000624239 5356 ntBASIC2.48□□□□□ -2.01
TM9SF3Q9HD45 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AP000776.1-201ENST00000530032 1663 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RNU4-92P-201ENST00000363783 136 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 Y_RNA.245-201ENST00000364493 95 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RNU6-757P-201ENST00000410334 100 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RNU4-72P-201ENST00000410754 173 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RNU6-1328P-201ENST00000410938 106 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 USP9YP33-201ENST00000412220 421 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AL953862.1-201ENST00000423016 168 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 FCF1P1-201ENST00000432690 571 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 USP9YP35-201ENST00000435696 412 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC013267.1-201ENST00000458227 267 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 RPS29P21-201ENST00000496272 170 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC109445.1-201ENST00000512356 383 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 SCARNA3-201ENST00000517097 143 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 SCARNA1-201ENST00000517138 166 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC010186.2-204ENST00000537668 439 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 MIR5092-201ENST00000583139 88 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC245297.2-201ENST00000610119 565 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 MTND5P30-201ENST00000452896 1731 ntBASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TM9SF3Q9HD45 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AL139276.1-201ENST00000311910 1001 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 RNU6-83P-201ENST00000384568 112 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 MIR513B-201ENST00000385136 84 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 RNU6-584P-201ENST00000410350 95 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 UBE2FP1-201ENST00000416536 447 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 EIF4EP4-201ENST00000424916 578 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 SNRPEP7-201ENST00000438350 220 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 MTND3P1-201ENST00000441336 220 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 FDX1P2-201ENST00000450769 375 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 RPL23AP45-201ENST00000476406 468 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC104090.1-201ENST00000506341 1171 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AP005902.1-201ENST00000521358 186 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AL139418.1-201ENST00000613613 177 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AL050303.3-201ENST00000613704 284 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 AC092447.10-201ENST00000620607 1652 ntBASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TM9SF3Q9HD45 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TM9SF3Q9HD45 RPL17P12-201ENST00000413391 526 ntBASIC2.45□□□□□ -2.02
TM9SF3Q9HD45 AL135786.1-201ENST00000415892 214 ntBASIC2.45□□□□□ -2.02
TM9SF3Q9HD45 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.45□□□□□ -2.02
TM9SF3Q9HD45 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
TM9SF3Q9HD45 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms