Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU1-64P-201ENST00000365443 163 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU1-73P-201ENST00000383971 164 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 SNORA75B-201ENST00000384053 137 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU6-606P-201ENST00000384721 111 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 MIR301A-201ENST00000385261 86 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 OR51A5P-201ENST00000415429 942 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 MTCYBP5-201ENST00000423752 1135 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC093151.1-201ENST00000427711 313 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC009220.1-201ENST00000451614 275 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU7-182P-201ENST00000459009 62 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU7-23P-201ENST00000459465 62 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC006512.1-201ENST00000468816 291 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RPL36AP51-201ENST00000487216 318 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RPS27AP10-201ENST00000496103 208 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC009901.1-201ENST00000506703 541 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC117522.3-201ENST00000507974 584 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC104806.1-201ENST00000508720 308 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC026402.1-201ENST00000513642 170 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU1-103P-201ENST00000516502 125 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 OR5BN1P-201ENST00000532955 829 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 PARP1P2-201ENST00000556806 195 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 EIF1P4-201ENST00000572664 335 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC024220.1-201ENST00000603675 484 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC007938.3-201ENST00000604965 623 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RNU1-30P-201ENST00000606575 163 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AL359740.1-201ENST00000624340 592 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC124864.2-201ENST00000624736 186 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC084035.1-201ENST00000634543 607 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 MIR6863-201ENST00000636112 90 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 AC119674.1-207ENST00000641355 633 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 CKAP2P1-201ENST00000555477 2049 ntBASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP1AQ9HD42 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 Y_RNA.3-201ENST00000362331 103 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RNU6-799P-201ENST00000363567 107 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 Y_RNA.381-201ENST00000365666 102 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 Y_RNA.409-201ENST00000383990 98 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RNU6-1029P-201ENST00000384109 107 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR141-201ENST00000384975 95 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RNU6-387P-201ENST00000411331 105 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 UBE2V1P10-201ENST00000414685 269 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AL158156.1-201ENST00000422509 473 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MTND1P1-201ENST00000445453 368 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 DPPA3P1-201ENST00000448050 469 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RPL26P9-201ENST00000457466 433 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RPS15AP34-201ENST00000487776 387 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 DNAJC8P1-201ENST00000554535 372 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AL157871.3-201ENST00000557231 293 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RN7SL703P-201ENST00000578485 302 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR1273C-201ENST00000578669 77 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC017083.3-201ENST00000609955 700 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MIR378J-201ENST00000611988 109 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC068792.1-201ENST00000621354 417 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC005609.4-201ENST00000625071 447 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms