Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTND4LP3-201ENST00000468320 276 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 RPS27P26-201ENST00000494583 239 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 MTATP6P9-201ENST00000515039 680 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC022662.1-201ENST00000580252 331 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AL139344.1-201ENST00000605228 195 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 AL109620.1-201ENST00000618738 1197 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC010378.1-201ENST00000619270 362 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.57□□□□□ -2
RPAP1Q9BWH6 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 MTND5P29-201ENST00000458676 1807 ntBASIC2.57□□□□□ -2
RPAP1Q9BWH6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 SNORA67.3-201ENST00000384366 140 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 RNA5SP354-201ENST00000391247 136 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 RPL7P37-201ENST00000425095 738 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC009414.1-201ENST00000427200 443 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 ISCA1P6-201ENST00000427740 390 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 USP9YP24-201ENST00000434374 697 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL049734.2-201ENST00000441066 616 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 USP9YP17-201ENST00000444617 696 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL591719.1-201ENST00000444669 744 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 RNU6-717P-201ENST00000459076 104 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC010587.2-201ENST00000511727 448 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 NRON-201ENST00000517270 370 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC080013.3-201ENST00000606839 578 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL133445.2-201ENST00000611191 527 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPAP1Q9BWH6 AC004852.3-201ENST00000614131 326 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AL356266.1-201ENST00000623311 483 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 AP000776.1-201ENST00000530032 1663 ntBASIC2.56□□□□□ -2
RPAP1Q9BWH6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP1Q9BWH6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AL356292.1-201ENST00000283110 373 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MIRLET7G-201ENST00000362280 84 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AL109755.1-201ENST00000401791 649 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 TXNP7-201ENST00000406296 293 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 HMGB3P2-201ENST00000411913 584 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MORF4L1P6-201ENST00000418771 268 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MTCO2P20-201ENST00000437339 673 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPAP1Q9BWH6 PIGFP3-201ENST00000441918 722 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 PTENP1-201ENST00000447117 1215 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MTCO1P27-201ENST00000448269 226 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 AP1S2P1-201ENST00000457344 379 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 RNU7-23P-201ENST00000459465 62 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 RPL7P18-201ENST00000478965 734 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 MTCO1P47-201ENST00000523889 1271 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 SUB1P1-201ENST00000524415 382 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AC103710.2-201ENST00000609912 942 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 AC093838.1-201ENST00000613014 469 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RPAP1Q9BWH6 AC026241.1-201ENST00000517873 2142 ntBASIC2.55□□□□□ -2
RPAP1Q9BWH6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 U3.20-201ENST00000390909 217 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 AL590084.2-201ENST00000401481 382 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPAP1Q9BWH6 MIR320C1-201ENST00000408566 88 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 AL139156.1-201ENST00000412785 841 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 RPL35AP22-201ENST00000436855 335 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 Z82210.1-201ENST00000440037 231 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
RPAP1Q9BWH6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 AC022447.3-201ENST00000506865 495 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 AC093281.2-201ENST00000510153 597 ntBASIC2.54□□□□□ -2
RPAP1Q9BWH6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.54□□□□□ -2
RPAP1Q9BWH6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPAP1Q9BWH6 OR11H5P-201ENST00000554039 926 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms