Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC234778.2-201ENST00000566241 354 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 MIR3146-201ENST00000580367 79 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 NRBF2P5-201ENST00000603087 788 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AL355877.2-201ENST00000603670 358 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC098826.3-201ENST00000603823 466 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 DPPA3P3-201ENST00000603842 430 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AP000787.2-201ENST00000604432 568 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 U2.21-201ENST00000637295 81 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RNA5SP68-201ENST00000363885 119 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 MIR627-201ENST00000384979 97 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPS20P2-201ENST00000402520 389 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 USP9YP20-201ENST00000419224 558 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 BPY2DP-201ENST00000422208 265 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AL353777.1-201ENST00000425552 326 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 ISCA1P1-201ENST00000426679 387 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 HMGB1P9-201ENST00000429856 646 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPS15AP5-201ENST00000436276 388 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 MTCYBP39-201ENST00000437562 491 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CECR9-201ENST00000453421 199 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CACYBPP2-201ENST00000453625 678 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPL37P6-201ENST00000460682 294 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC126389.1-201ENST00000477436 290 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPS29P20-201ENST00000489592 171 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC114781.4-201ENST00000513707 639 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 MRPS36P5-201ENST00000551909 298 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 RPS3AP4-201ENST00000555161 764 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 AC009159.1-201ENST00000618386 642 ntBASIC2.75□□□□□ -1.97
ZNF560Q96MR9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF560Q96MR9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 RNU6-500P-201ENST00000362349 107 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 MIR27B-201ENST00000385129 97 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AL513475.1-201ENST00000406602 315 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 RNU2-62P-201ENST00000410868 191 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC080125.1-201ENST00000414888 684 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 GDI2P2-201ENST00000445131 608 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 MRPS36P2-201ENST00000512569 299 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 RNA5SP148-201ENST00000516527 94 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 NACAP3-201ENST00000552100 481 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 MIR4760-201ENST00000585040 80 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC107294.1-201ENST00000609524 467 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC025594.3-201ENST00000613068 790 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC079416.3-201ENST00000624479 549 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 AC007671.2-201ENST00000637344 619 ntBASIC2.74□□□□□ -1.97
ZNF560Q96MR9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF560Q96MR9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 AC110491.1-201ENST00000562191 2010 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF560Q96MR9 UBE2L2-201ENST00000254302 429 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 RNU6-778P-201ENST00000363269 103 ntBASIC2.73□□□□□ -1.97
ZNF560Q96MR9 U3.12-201ENST00000364498 214 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms