Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC022893.3-201ENST00000607665 437 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC107294.1-201ENST00000609524 467 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC005332.10-201ENST00000612725 619 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC072046.2-201ENST00000618366 268 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 MTND5P29-201ENST00000458676 1807 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 SNORA24.1-201ENST00000384401 135 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 Y_RNA.559-201ENST00000384686 107 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 ISCA1P1-201ENST00000426679 387 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 DLGAP5P1-201ENST00000430307 464 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 VN1R108P-201ENST00000431580 830 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC073063.1-201ENST00000434352 607 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 MTATP6P16-201ENST00000434543 526 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 RPS12P18-201ENST00000442381 270 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 C1DP4-201ENST00000455429 424 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 MTCO2P4-201ENST00000517968 247 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC007536.1-201ENST00000533382 349 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 MIR3922-201ENST00000585192 84 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC098848.2-201ENST00000588023 330 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 NUTF2P8-201ENST00000604593 363 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 U3.45-201ENST00000607547 219 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AC022336.2-201ENST00000568966 2538 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 AL137003.2-201ENST00000606924 2538 ntBASIC4.06□□□□□ -1.76
CCDC136Q96JN2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC136Q96JN2 RNU6-181P-201ENST00000363225 107 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 OR5H15-201ENST00000383696 930 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 RN7SKP58-201ENST00000411010 305 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AL663109.1-201ENST00000411498 844 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 RPS29P4-201ENST00000414733 161 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 PIGFP2-201ENST00000421400 651 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 HMGN2P30-201ENST00000423237 256 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AL714022.1-201ENST00000439897 151 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 RPL39P36-201ENST00000490784 156 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 ARL4AP2-201ENST00000507378 601 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AC108078.2-201ENST00000510750 236 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 Y_RNA.689-201ENST00000516589 107 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 RNU6-445P-201ENST00000516949 107 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AL391840.1-201ENST00000571144 367 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AC024619.4-201ENST00000580924 316 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 MIR4444-1-201ENST00000581696 74 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 MIR4444-2-201ENST00000584390 74 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 HMGN2P15-201ENST00000585707 270 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AC087683.1-201ENST00000591187 441 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 Z84480.1-201ENST00000605131 311 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AL157817.1-201ENST00000614264 790 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 Z99571.1-201ENST00000636677 394 ntBASIC4.05□□□□□ -1.76
CCDC136Q96JN2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC136Q96JN2 AL353743.1-202ENST00000431724 1695 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 MIR1-2-201ENST00000384961 85 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 MIR670-201ENST00000390142 98 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 BMS1P22-201ENST00000414726 313 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AL589823.1-201ENST00000429577 183 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 HMGN2P31-201ENST00000432430 273 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 GPR143P-201ENST00000434155 205 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC092798.1-201ENST00000458542 409 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC139453.3-201ENST00000493276 369 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 SUMO2P6-201ENST00000505273 288 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC117522.1-201ENST00000509821 380 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 MTND3P5-201ENST00000512798 333 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 RNA5SP76-201ENST00000516277 87 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 RNU6-56P-201ENST00000516986 93 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 RNU6-410P-201ENST00000517006 107 ntBASIC4.04□□□□□ -1.76
CCDC136Q96JN2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms