Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ELOCP32-201ENST00000548625 324 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC009097.3-201ENST00000563557 1018 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 VN1R90P-201ENST00000595717 726 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC073544.2-201ENST00000601155 540 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC091152.3-201ENST00000604227 325 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC005000.2-201ENST00000605468 310 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC108747.1-201ENST00000609508 535 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AL589994.2-201ENST00000621124 579 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC010149.2-201ENST00000637608 315 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VMP1Q96GC9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 MIR22-201ENST00000362190 85 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 RNU1-140P-201ENST00000365040 165 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 SNORD67-201ENST00000390833 111 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 GDI2P2-201ENST00000445131 608 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 ARL2BPP2-201ENST00000550907 489 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 MIR4765-201ENST00000585007 77 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 AC008121.1-201ENST00000603244 268 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 AP000860.1-201ENST00000605250 559 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 AL021997.1-201ENST00000605757 193 ntBASIC2.85□□□□□ -1.95
VMP1Q96GC9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VMP1Q96GC9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 RNU6-188P-201ENST00000364207 107 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 SNORA72.3-201ENST00000365074 132 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 MIR128-1-201ENST00000384921 82 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 RNU2-36P-201ENST00000410361 191 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC096664.2-201ENST00000411843 406 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 FABP5P14-201ENST00000437273 393 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 RPS29P6-201ENST00000438196 145 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC093156.1-201ENST00000440382 670 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 BRK1P2-201ENST00000442875 223 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC011753.1-201ENST00000451001 220 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 RPS29P2-201ENST00000479278 136 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 MRPL42P6-201ENST00000486397 371 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 RNU6-826P-201ENST00000516827 104 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 RNU6-1183P-201ENST00000517054 60 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 MTND4LP18-201ENST00000526864 291 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 OR5BN1P-201ENST00000532955 829 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC010186.2-204ENST00000537668 439 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC083760.1-201ENST00000589621 670 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AL160281.1-201ENST00000605307 311 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AL050303.3-201ENST00000613704 284 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC006338.1-201ENST00000618453 749 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.84□□□□□ -1.95
VMP1Q96GC9 AC000403.1-201ENST00000613696 3585 ntBASIC2.84□□□□□ -1.95
VMP1Q96GC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
VMP1Q96GC9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
VMP1Q96GC9 AC092104.1-201ENST00000497346 1441 ntBASIC2.84□□□□□ -1.96
VMP1Q96GC9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VMP1Q96GC9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 GNG5P1-201ENST00000255500 204 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 RNU6-1214P-201ENST00000363650 109 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 RNU6-525P-201ENST00000363685 104 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 SNORA54-201ENST00000384281 123 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 RNU6-809P-201ENST00000384461 107 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 MIR147B-201ENST00000390185 80 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 SNORA48.2-201ENST00000390926 124 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 RPS4XP7-201ENST00000406274 780 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.83□□□□□ -1.96
VMP1Q96GC9 Z92545.1-201ENST00000411782 234 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 PTGES3P4-201ENST00000426243 356 ntBASIC2.83□□□□□ -1.96
VMP1Q96GC9 MTCYBP39-201ENST00000437562 491 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms