Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.465-201ENST00000384293 102 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AL139397.2-201ENST00000404529 772 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RN7SKP266-201ENST00000410232 287 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RNU2-49P-201ENST00000410666 184 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RNU4-72P-201ENST00000410754 173 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 HMGB1P11-201ENST00000413899 637 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 UBE2FP1-201ENST00000416536 447 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 DPH3P2-201ENST00000422618 250 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 SKA2P1-201ENST00000425592 390 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC007560.1-201ENST00000426912 237 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 ELOCP14-201ENST00000428070 331 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 TXNL1P1-201ENST00000429528 554 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 ELOCP7-201ENST00000439968 331 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 PGBD4P3-201ENST00000440731 581 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 IFNA11P-201ENST00000446352 526 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 TRBV12-1-201ENST00000479785 344 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RPS27AP10-201ENST00000496103 208 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC116353.3-201ENST00000511215 249 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AGGF1P5-201ENST00000567900 919 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AF038458.1-201ENST00000588406 262 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC021171.1-201ENST00000603137 706 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AL596327.1-201ENST00000603629 213 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AL133445.2-201ENST00000611191 527 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC013562.2-201ENST00000611632 603 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AC080128.1-201ENST00000474389 1917 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC010329.5-201ENST00000623497 2174 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 RNU6-1176P-201ENST00000390955 107 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 RNU6-920P-201ENST00000410926 92 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 MTATP6P19-201ENST00000413797 659 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC096649.2-201ENST00000416186 393 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 USP12PX-201ENST00000432383 1057 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 UBE2D3P1-201ENST00000436669 444 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 SNRPEP9-201ENST00000436794 238 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 MTCO2P20-201ENST00000437339 673 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC098831.1-201ENST00000440661 216 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 MTATP6P30-201ENST00000443540 664 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC108729.1-201ENST00000487812 947 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 RPL9P6-201ENST00000492764 598 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC104090.1-201ENST00000506341 1171 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AL133153.1-201ENST00000557756 303 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC023813.2-201ENST00000564321 469 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC135628.1-201ENST00000568867 534 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC060771.1-201ENST00000582031 164 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AL121652.1-201ENST00000608851 448 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AP000676.3-201ENST00000623299 569 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 PCMTD1P7-201ENST00000634506 357 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
ECHDC3Q96DC8 AC110491.1-201ENST00000562191 2010 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 RPL21P132-201ENST00000331267 462 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 RNU6-462P-201ENST00000362659 105 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 NDUFS5P4-201ENST00000412983 318 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 MTND1P28-201ENST00000435623 950 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 OSTCP8-201ENST00000445117 448 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 PAXBP1P1-201ENST00000449315 447 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AL353705.4-201ENST00000449661 238 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms