Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 ADI1P3-201ENST00000549509 470 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 HIF1AP1-201ENST00000553642 175 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC010653.1-201ENST00000571108 881 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 MIR4703-201ENST00000577728 79 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC106900.2-201ENST00000604994 317 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC011155.2-201ENST00000623202 216 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC004972.1-201ENST00000623934 2209 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 FRG1CP-201ENST00000358464 769 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AL138878.1-201ENST00000405131 347 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 OR9R1P-201ENST00000412200 877 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC006028.1-201ENST00000438379 402 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 MTND4P25-201ENST00000441039 533 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RPL21P13-201ENST00000488305 481 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 TRBV12-2-201ENST00000489763 344 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 SNORA31.3-201ENST00000516029 96 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 RN7SKP219-201ENST00000516825 296 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 SNORD60.2-201ENST00000516883 86 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AP001804.3-201ENST00000525146 880 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC118273.2-201ENST00000532092 465 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC020914.4-201ENST00000597690 277 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 BNIP3P30-201ENST00000601184 574 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AL158032.1-201ENST00000605401 106 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC008945.2-201ENST00000606056 604 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC012409.4-201ENST00000612923 249 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 MTND4P14-201ENST00000435799 1354 ntBASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM43Q96BQ3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM43Q96BQ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
TRIM43Q96BQ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM43Q96BQ3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 RNU6-552P-201ENST00000362869 119 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 DEFB109C-201ENST00000382575 264 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 DEFB109B-201ENST00000382656 264 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 RNU6-301P-201ENST00000384277 107 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 FGF7P8-201ENST00000402994 292 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AL136116.1-201ENST00000403591 381 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 HSPE1P8-201ENST00000406997 288 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 RNA5SP118-201ENST00000410385 109 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 OR6C66P-201ENST00000414917 930 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC097462.2-201ENST00000504623 481 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC092436.1-201ENST00000506450 503 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC074344.1-201ENST00000512823 224 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 SUMO2P20-201ENST00000520803 283 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC060780.3-201ENST00000589464 80 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AL359547.2-201ENST00000615810 418 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC009033.1-201ENST00000624279 431 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 MTND5P42-201ENST00000637720 498 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC233263.6-201ENST00000631132 1963 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AF127577.6-201ENST00000623352 2191 ntBASIC3.83□□□□□ -1.8
TRIM43Q96BQ3 AC008568.2-201ENST00000623862 2313 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms