Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR627-201ENST00000384979 97 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC005019.1-201ENST00000436455 431 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AL513043.1-201ENST00000439124 535 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC009296.1-201ENST00000443146 155 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 Z75741.1-201ENST00000446793 314 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AL136380.1-201ENST00000447970 162 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AL033528.1-201ENST00000453780 140 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 TRBV1-201ENST00000476502 284 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 BET1P1-201ENST00000482276 359 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC139453.3-201ENST00000493276 369 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 HSPD1P15-201ENST00000505573 1122 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC109927.2-201ENST00000506416 303 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC022447.1-201ENST00000515358 464 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC060788.1-201ENST00000521318 469 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC021739.1-201ENST00000559631 174 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC007938.3-201ENST00000604965 623 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AC008250.2-201ENST00000615261 205 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AP001506.1-201ENST00000615444 211 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 PISRT1-201ENST00000626175 531 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 CU459211.1-201ENST00000635667 749 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 TEX21P-201ENST00000447107 1476 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 U8.3-201ENST00000363321 132 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 Y_RNA.126-201ENST00000363382 111 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 SNORA20.2-201ENST00000383922 131 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 RNU6-39P-201ENST00000384344 107 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 SNORA40.3-201ENST00000390964 122 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC003071.1-201ENST00000451219 789 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 SNORD42A-201ENST00000459584 64 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 RN7SL293P-201ENST00000481765 281 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC022616.3-201ENST00000523940 148 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC011611.1-201ENST00000552179 197 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC007151.1-201ENST00000572774 483 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC024619.4-201ENST00000580924 316 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC005771.1-201ENST00000585581 349 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 NRBF2P1-201ENST00000587407 859 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AL359198.2-201ENST00000611836 194 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC130324.3-201ENST00000614165 542 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AC097520.1-201ENST00000624435 385 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 AL161912.2-201ENST00000565707 3007 ntBASIC2.91□□□□□ -1.94
VPS33AQ96AX1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
VPS33AQ96AX1 FARSBP1-201ENST00000435808 1778 ntBASIC2.9□□□□□ -1.94
VPS33AQ96AX1 ADAM3A-203ENST00000461344 2157 ntBASIC2.9□□□□□ -1.94
VPS33AQ96AX1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
VPS33AQ96AX1 OR5J1P-201ENST00000313544 939 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 USP9YP6-201ENST00000413550 854 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL158156.1-201ENST00000422509 473 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 MTATP6P17-201ENST00000431030 672 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 RPL23AP30-201ENST00000432419 501 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 RPS15AP7-201ENST00000439294 405 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 Vault.3-201ENST00000516676 95 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC009902.1-201ENST00000519351 183 ntBASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS33AQ96AX1 AC006199.1-201ENST00000548728 219 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms