Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 RPS24P13-201ENST00000442520 397 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MTND1P18-201ENST00000448191 573 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 ELOCP23-201ENST00000452014 332 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 SNORA59A-201ENST00000459326 152 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MTCO3P38-201ENST00000468910 766 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL160314.1-201ENST00000490836 438 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 FAM92A1P2-202ENST00000504766 877 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC117522.3-201ENST00000507974 584 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC104806.1-201ENST00000508720 308 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 RN7SKP209-201ENST00000516888 304 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MTND1P35-201ENST00000526739 508 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 ADI1P3-201ENST00000549509 470 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL121576.1-201ENST00000556055 276 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL161798.1-201ENST00000604630 131 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 RBM11P1-201ENST00000604951 799 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AC009570.1-201ENST00000609599 745 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 AL359547.2-201ENST00000615810 418 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MIR7112-201ENST00000616126 65 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 MIR8057-201ENST00000620957 69 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 YWHAEP7-203ENST00000622054 312 ntBASIC3.53□□□□□ -1.84
HMGB4Q8WW32 FER-210ENST00000628534 558 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGB4Q8WW32 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HMGB4Q8WW32 NCAPGP1-201ENST00000505112 1814 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.89-201ENST00000363031 102 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 RNU6-534P-201ENST00000364877 106 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 HSPE1P8-201ENST00000406997 288 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 GTF2IP20-201ENST00000431663 360 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AL596276.1-201ENST00000434465 418 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC092573.2-201ENST00000434546 243 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 Z82210.1-201ENST00000440037 231 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 PIGFP3-201ENST00000441918 722 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AL118520.1-201ENST00000450770 291 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 KC877373.1-201ENST00000479066 408 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC093663.1-201ENST00000497190 394 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 MIR4801-201ENST00000582704 82 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AL158032.1-201ENST00000605401 106 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC104458.1-201ENST00000608243 463 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC107294.1-201ENST00000609524 467 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.52□□□□□ -1.85
HMGB4Q8WW32 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGB4Q8WW32 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.38-201ENST00000362617 102 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNU6-552P-201ENST00000362869 119 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNU6-512P-201ENST00000364438 103 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 SNORD6-201ENST00000365444 73 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.534-201ENST00000384599 112 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.573-201ENST00000384763 105 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 MIR325-201ENST00000385260 98 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNU6-903P-201ENST00000391270 109 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AP000567.1-201ENST00000406413 156 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 MTHFD2P2-201ENST00000407725 247 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNU2-29P-201ENST00000410423 189 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RN7SKP53-201ENST00000411337 315 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 MTND1P23-201ENST00000416931 372 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RPL7P46-201ENST00000425129 740 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 CALM2P2-201ENST00000428512 440 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 SEPT14P3-201ENST00000439401 183 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AL732372.2-207ENST00000445840 183 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 SEPT14P2-201ENST00000453405 183 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AL135752.1-201ENST00000479477 471 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 BTF3L4P4-201ENST00000506381 449 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC109927.2-201ENST00000506416 303 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms