Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNED1Q8TER0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNED1Q8TER0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNED1Q8TER0 Y_RNA.97-201ENST00000363094 102 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 RNU4-76P-201ENST00000364509 141 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 RNU6-1009P-201ENST00000390996 107 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 RPS3AP36-201ENST00000398190 775 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 FCF1P2-201ENST00000415284 583 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 BX295541.1-201ENST00000417774 250 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 YPEL5P1-201ENST00000419731 367 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC073464.1-201ENST00000429823 534 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 MTCO2P11-201ENST00000431069 680 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL451074.3-201ENST00000437709 472 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL590365.1-201ENST00000450788 243 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 NDUFA5P7-201ENST00000452914 242 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 snoU13.3-201ENST00000459441 104 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AP000852.1-201ENST00000472460 573 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC013828.1-201ENST00000481845 158 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC114981.1-201ENST00000503897 678 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC024589.1-201ENST00000512207 263 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 RNU6-358P-201ENST00000516564 75 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 ZNF861P-201ENST00000588126 639 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC112187.2-201ENST00000604345 283 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC008536.2-201ENST00000607284 349 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL121757.2-201ENST00000611223 313 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC136475.10-201ENST00000620253 385 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 AL359697.1-201ENST00000624879 587 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
SNED1Q8TER0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.22□□□□□ -1.89
SNED1Q8TER0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNED1Q8TER0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SNED1Q8TER0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 U8.2-201ENST00000363156 134 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 RNU6-1090P-201ENST00000364065 94 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 Y_RNA.295-201ENST00000364918 102 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 RNU6-1226P-201ENST00000384317 107 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 U8.14-201ENST00000390843 143 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL450338.1-201ENST00000407987 512 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 FCF1P1-201ENST00000432690 571 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL603825.1-201ENST00000438481 80 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL118496.2-201ENST00000448300 230 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 GAPDHP17-201ENST00000449858 1001 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 RPS20P22-201ENST00000473700 357 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC019235.1-201ENST00000503847 207 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AP001893.2-201ENST00000526949 202 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 HPRT1P3-201ENST00000539521 576 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AP002770.2-201ENST00000543613 532 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 CYCSP2-201ENST00000558168 301 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL391840.1-201ENST00000571144 367 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC009977.1-201ENST00000586015 570 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 UBE2V2P2-201ENST00000587677 504 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL117336.2-201ENST00000602435 335 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC078795.3-201ENST00000602913 472 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC007621.1-201ENST00000604544 437 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC087045.1-201ENST00000605856 382 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AL359880.1-201ENST00000621879 266 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC026634.1-201ENST00000634369 198 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 U6.98-201ENST00000637157 84 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 AC241585.2-209ENST00000638217 143 ntBASIC3.21□□□□□ -1.9
SNED1Q8TER0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNED1Q8TER0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms