Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-1035P-201ENST00000384477 107 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 Y_RNA.580-201ENST00000391004 95 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 AC007098.1-201ENST00000420122 367 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 GAPDHP27-201ENST00000447427 1020 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 FABP5P13-201ENST00000452144 328 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 RN7SL432P-201ENST00000484057 298 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 ACA59.1-201ENST00000515966 143 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 ERHP1-201ENST00000523006 310 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 AC007458.1-201ENST00000542812 373 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 RNU6-85P-201ENST00000605989 107 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 MIR3976-201ENST00000606807 139 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 AL589994.2-201ENST00000621124 579 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 AC007785.2-201ENST00000598627 1916 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 MAPK10-304ENST00000641341 3984 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 MAPK10-286ENST00000641208 8747 ntBASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
NEDD1Q8NHV4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 MFSD8-242ENST00000641690 4199 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 MIR3065-201ENST00000390137 79 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 RNU6-325P-201ENST00000411132 105 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 TMEM167AP1-201ENST00000423409 219 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AL159987.2-201ENST00000432754 307 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AC091390.1-201ENST00000433904 331 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 snoU109.6-201ENST00000516831 118 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 AP001642.1-201ENST00000624727 2117 ntBASIC5.23□□□□□ -1.57
NEDD1Q8NHV4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNU6-1284P-201ENST00000363701 100 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNU6-923P-201ENST00000364753 107 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNU6-290P-201ENST00000365212 101 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNU6-45P-201ENST00000384471 107 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNU6-178P-201ENST00000384631 104 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL591704.1-201ENST00000432574 275 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AP001324.2-201ENST00000461163 319 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC091179.1-201ENST00000461606 579 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RPL9P9-202ENST00000466501 579 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RN7SL385P-201ENST00000468873 276 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC108751.2-201ENST00000469993 231 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC022034.3-201ENST00000471393 478 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RPS27AP1-201ENST00000475545 471 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC108043.1-201ENST00000512696 574 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RNA5SP170-201ENST00000517150 101 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL442163.3-201ENST00000554110 156 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC233702.2-202ENST00000562547 291 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 MIR4282-201ENST00000583613 67 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AL162424.1-201ENST00000602325 221 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC079587.1-201ENST00000603846 277 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC005520.5-201ENST00000613926 164 ntBASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.22□□□□□ -1.57
NEDD1Q8NHV4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
NEDD1Q8NHV4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
NEDD1Q8NHV4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.21□□□□□ -1.58
NEDD1Q8NHV4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms