Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-798P-201ENST00000516912 103 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNU6-840P-201ENST00000517275 65 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 SETP7-201ENST00000552169 453 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 DUXAP1-201ENST00000556632 463 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC009318.4-201ENST00000620496 486 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MTND2P41-201ENST00000637599 773 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MIR767-201ENST00000390228 109 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RN7SKP101-201ENST00000411376 320 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC234781.2-201ENST00000426370 994 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 snoU13.7-201ENST00000459220 104 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MTCYBP35-201ENST00000503630 1137 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 HMGB3P17-201ENST00000504195 649 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL445493.3-201ENST00000619568 477 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 SNORD114-27-201ENST00000363766 70 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNU6-921P-201ENST00000384361 107 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RPS15AP38-201ENST00000413110 372 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC093422.3-201ENST00000428506 305 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNA5SP310-201ENST00000459084 116 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 ARL2BPP4-201ENST00000506854 471 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC022690.1-201ENST00000526681 550 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC124283.4-201ENST00000581815 456 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC012443.1-201ENST00000605605 231 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNU6-1249P-201ENST00000363237 111 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC012497.1-201ENST00000429392 575 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RPS27AP10-201ENST00000496103 208 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC104685.1-201ENST00000502445 371 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AP001429.1-201ENST00000602568 530 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC093838.1-201ENST00000613014 469 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL590099.1-201ENST00000615276 138 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 uc_338.12-201ENST00000616344 181 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL162373.1-201ENST00000620433 407 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 ZNF663P-202ENST00000641770 1131 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNA5SP258-201ENST00000362750 119 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 MIR421-201ENST00000365696 85 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNU6-35P-201ENST00000384530 107 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL356057.2-201ENST00000403318 432 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RNU2-41P-201ENST00000410991 178 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL356320.2-201ENST00000417263 507 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 UBE2D3P2-201ENST00000424409 445 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 RPS15AP27-201ENST00000449183 343 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC104108.1-201ENST00000509930 412 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 AC008962.1-201ENST00000605729 304 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.44□□□□□ -2.34
SYNE1Q8NF91 DDX43P2-201ENST00000604753 1354 ntBASIC0.44□□□□□ -2.34
SYNE1Q8NF91 Y_RNA.294-201ENST00000364916 102 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RNA5SP252-201ENST00000391131 119 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL512844.2-201ENST00000433990 593 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SDCBPP1-201ENST00000440192 890 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL050341.1-201ENST00000447743 313 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 RNA5SP233-201ENST00000459153 113 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 VPS26AP1-201ENST00000483197 979 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC139103.1-201ENST00000534696 1030 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 MIR4658-201ENST00000584344 65 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC022387.2-201ENST00000604050 448 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC083865.1-201ENST00000636634 831 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 SNORA68.1-201ENST00000364537 132 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 PAICSP7-201ENST00000419829 962 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 BX510359.4-201ENST00000423750 193 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AL031183.1-201ENST00000457667 207 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC091304.6-201ENST00000619761 202 ntBASIC0.43□□□□□ -2.34
SYNE1Q8NF91 AC095031.1-201ENST00000623685 672 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms