Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL391417.1-201ENST00000404100 426 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 Z99755.1-201ENST00000414048 380 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 Z82205.1-201ENST00000428456 297 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 TIMM9P1-201ENST00000436122 256 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC025750.2-201ENST00000442609 450 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 RPS29P15-201ENST00000458329 171 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 Y_RNA.639-201ENST00000458981 102 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 GMFBP1-201ENST00000467831 427 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC092436.1-201ENST00000506450 503 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 TMEM248P1-201ENST00000510579 951 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 RPL7P20-201ENST00000520308 745 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 DNAJC8P1-201ENST00000554535 372 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AL118558.2-201ENST00000556294 238 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC090615.1-201ENST00000577519 154 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 OR6R2P-201ENST00000609216 300 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC103710.2-201ENST00000609912 942 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 AC008121.3-201ENST00000618726 433 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNY3P13-201ENST00000365542 102 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 Y_RNA.384-201ENST00000383909 102 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNU6-38P-201ENST00000384085 107 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNU6-574P-201ENST00000384265 107 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 SNORA70E-201ENST00000384492 135 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNU6-1160P-201ENST00000384546 104 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC245054.2-201ENST00000415639 319 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AL451054.2-201ENST00000420896 202 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 HSPE1P1-201ENST00000421494 318 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC005517.2-201ENST00000424673 553 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 ERLEC1P1-201ENST00000433806 578 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 MTATP6P16-201ENST00000434543 526 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RPS20P5-201ENST00000434808 360 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RPS3AP52-201ENST00000435639 297 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC104308.1-201ENST00000454621 333 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 snoU13.8-201ENST00000458890 104 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNU6-333P-201ENST00000459117 107 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RN7SL93P-201ENST00000463035 293 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC027575.1-201ENST00000481064 460 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RPS15AP36-201ENST00000492022 382 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RN7SKP219-201ENST00000516825 296 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AP001804.3-201ENST00000525146 880 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC128657.1-201ENST00000549459 145 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AL133215.3-201ENST00000609801 448 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC010205.1-201ENST00000616668 449 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC007998.5-201ENST00000622938 237 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC091925.2-201ENST00000625059 256 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 AC018529.3-201ENST00000624212 2254 ntBASIC4.2□□□□□ -1.74
SYNE4Q8N205 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE4Q8N205 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE4Q8N205 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SYNE4Q8N205 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SYNE4Q8N205 NCAPGP1-201ENST00000505112 1814 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SYNE4Q8N205 RNU6-254P-201ENST00000363377 107 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 Y_RNA.493-201ENST00000384422 102 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 MIR559-201ENST00000385188 96 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 SNORD37.1-201ENST00000390968 65 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 RNU6-193P-201ENST00000410977 107 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 AC009161.1-201ENST00000417306 376 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SYNE4Q8N205 MTND3P2-201ENST00000438452 342 ntBASIC4.19□□□□□ -1.74
SYNE4Q8N205 AC079781.2-201ENST00000446424 169 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms