Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-9-201ENST00000384776 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 SNORD37.2-201ENST00000391075 66 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNA5SP241-201ENST00000391326 114 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RPS15AP40-201ENST00000419621 391 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AL138785.1-201ENST00000425821 331 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC009238.2-201ENST00000431026 355 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RANP8-201ENST00000444720 713 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC016700.2-201ENST00000446011 156 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AL162389.1-201ENST00000449233 177 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RPL21P126-201ENST00000470049 478 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 HMGB3P16-201ENST00000508037 287 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RPL23AP87-202ENST00000573039 466 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RN7SL290P-201ENST00000578661 300 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 RNU6-6P-201ENST00000606623 107 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 MIR6758-201ENST00000620653 63 ntBASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS3Q8IXF0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 CUL1P1-201ENST00000509510 2425 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 ZNF720P1-201ENST00000562403 1939 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 MAPK10-263ENST00000641052 4307 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 Y_RNA.116-201ENST00000363292 103 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-626P-201ENST00000363354 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-512P-201ENST00000364438 103 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-1175P-201ENST00000365200 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-36P-201ENST00000384172 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-16P-201ENST00000384385 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNA5SP187-201ENST00000384400 119 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 SNORA70.10-201ENST00000384515 134 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-15P-201ENST00000384534 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RPS4XP3-201ENST00000398541 413 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 MIR298-201ENST00000401212 88 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 SNORD12B-201ENST00000410433 91 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RPL19P16-201ENST00000433839 588 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC090804.1-201ENST00000448870 490 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC010655.1-201ENST00000449336 292 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RPL23AP2-201ENST00000471227 466 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC117440.1-201ENST00000474107 571 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RN7SKP276-201ENST00000516242 268 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RNU6-762P-201ENST00000517107 102 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 SNRPGP16-201ENST00000533275 226 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC090049.2-201ENST00000550377 109 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 MIR4423-201ENST00000580922 80 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 RPL23AP88-201ENST00000605759 454 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC005046.1-201ENST00000608515 625 ntBASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS3Q8IXF0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 FTLP6-201ENST00000355274 422 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RN7SKP227-201ENST00000364445 330 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 U8.6-201ENST00000364939 135 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RNU6-20P-201ENST00000384106 107 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RNU6-843P-201ENST00000384454 104 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 BX510359.2-201ENST00000417920 305 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 NDUFB4P7-201ENST00000423198 363 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 RPL18P10-201ENST00000425606 538 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 BTF3P11-201ENST00000426582 477 ntBASIC5.16□□□□□ -1.58
NPAS3Q8IXF0 EZH2P1-201ENST00000431167 291 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms