Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DUSP12P1-201ENST00000612874 516 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 SNORA8.3-201ENST00000384679 139 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 RN7SKP61-201ENST00000410642 295 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 RPL39P28-201ENST00000465655 155 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC010285.1-201ENST00000470580 392 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS13CQ709C8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
VPS13CQ709C8 OR9R1P-201ENST00000412200 877 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 AL358794.1-201ENST00000445689 381 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC103851.1-201ENST00000506833 274 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 OR5BM1P-201ENST00000512021 366 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
VPS13CQ709C8 SNRPGP17-201ENST00000603780 214 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 SDR42E1P2-201ENST00000614861 481 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 SDR42E1P4-201ENST00000620894 481 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 HMGB3P3-201ENST00000510526 400 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 SUB1P1-201ENST00000524415 382 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS13CQ709C8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC008555.8-201ENST00000623602 2168 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 SNORD23.1-201ENST00000408212 104 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC007275.1-201ENST00000621243 671 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
VPS13CQ709C8 MIR26B-201ENST00000362251 77 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 RNU6-799P-201ENST00000363567 107 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC096632.1-201ENST00000427395 310 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 RPL7P31-201ENST00000450192 724 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC005410.1-202ENST00000460347 485 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 TRBVB-201ENST00000477100 408 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 MIR4716-201ENST00000579628 84 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC008749.1-201ENST00000597650 306 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC008751.2-201ENST00000597885 980 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC068620.3-201ENST00000602749 560 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AL022578.1-201ENST00000439330 1433 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 RNU6-1181P-201ENST00000384191 106 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 U8.14-201ENST00000390843 143 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC025768.1-201ENST00000510057 267 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 SNORD116-26-201ENST00000516006 96 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 RNU6-711P-201ENST00000517255 106 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC024060.1-201ENST00000607052 494 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC245884.12-201ENST00000615364 59 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 Y_RNA.572-201ENST00000384757 98 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.42□□□□□ -2.34
VPS13CQ709C8 AF279873.1-201ENST00000523393 313 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC022662.1-201ENST00000580252 331 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC135178.6-201ENST00000605314 398 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AC004908.2-201ENST00000609090 574 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 AL161734.1-201ENST00000609720 557 ntBASIC0.42□□□□□ -2.34
VPS13CQ709C8 MTND4P34-201ENST00000572715 1371 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 MIR124-3-201ENST00000384866 87 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.41□□□□□ -2.34
VPS13CQ709C8 MZT1P2-201ENST00000604387 248 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 RNU6-84P-201ENST00000607737 102 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC240442.1-201ENST00000616055 283 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 CIR1P3-201ENST00000405137 479 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 MED14P1-201ENST00000430517 648 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 SSXP4-201ENST00000451349 245 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13CQ709C8 MIR4458-201ENST00000578872 75 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AL355297.2-201ENST00000604792 129 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AP001486.3-201ENST00000615334 372 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC083865.1-201ENST00000636634 831 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
VPS13CQ709C8 RFESDP1-201ENST00000422350 461 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC068831.7-201ENST00000616954 363 ntBASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13CQ709C8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
VPS13CQ709C8 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL356867.1-201ENST00000429623 299 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 TPT1P8-201ENST00000510120 555 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL121890.5-201ENST00000620848 304 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 SYF2P1-201ENST00000550658 413 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC084033.1-201ENST00000550830 633 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL031183.1-201ENST00000457667 207 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 SNORD108-201ENST00000459332 71 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 RPL31P60-201ENST00000478450 367 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL135752.1-201ENST00000479477 471 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 IGLVI-20-201ENST00000519296 130 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.4□□□□□ -2.35
VPS13CQ709C8 AC073111.2-201ENST00000605657 1075 ntBASIC0.4□□□□□ -2.35
VPS13CQ709C8 AL356473.1-201ENST00000406203 1408 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 SNORA63.3-201ENST00000362682 132 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 MIR508-201ENST00000384857 115 ntBASIC0.39□□□□□ -2.35
VPS13CQ709C8 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms