Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SNRPGP15-201ENST00000600149 222 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 MIR4727-201ENST00000622232 55 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 uc_338.22-201ENST00000622722 187 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 NOL8P1-201ENST00000508336 3529 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.66
RUFY4Q6ZNE9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.65□□□□□ -1.66
RUFY4Q6ZNE9 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC117470.1-201ENST00000381974 330 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 RPS4XP7-201ENST00000406274 780 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 MIR1290-201ENST00000408735 78 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AL137792.2-201ENST00000443484 235 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 RPS24P6-201ENST00000452670 400 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 RN7SL542P-201ENST00000467147 294 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 SMURF2P1-201ENST00000514992 481 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-976P-201ENST00000516086 111 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC026371.1-201ENST00000551867 419 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC022655.2-201ENST00000577280 318 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 AC006133.1-201ENST00000617106 264 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 MTND5P19-201ENST00000424872 1794 ntBASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.65□□□□□ -1.67
RUFY4Q6ZNE9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-639P-201ENST00000384074 107 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-293P-201ENST00000411259 106 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AL645568.3-201ENST00000433683 316 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RPS29P7-201ENST00000439662 171 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RPL30P15-201ENST00000457129 321 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 snoU13.24-201ENST00000458998 104 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RPS29P19-201ENST00000479709 171 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC104164.2-201ENST00000496953 495 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 HMGB1P22-201ENST00000505315 124 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-143P-201ENST00000516942 93 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU1-54P-201ENST00000517181 120 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-988P-201ENST00000519081 107 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 SNRPGP16-201ENST00000533275 226 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 MIR3158-1-201ENST00000583596 81 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 MIR548AC-201ENST00000585049 88 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC040896.1-201ENST00000613819 479 ntBASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RUFY4Q6ZNE9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 KPNA2P1-201ENST00000458289 1591 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 Y_RNA.28-201ENST00000362554 111 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 U3.15-201ENST00000365398 212 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MIR514A1-201ENST00000385133 98 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MIR301A-201ENST00000385261 86 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MIR670-201ENST00000390142 98 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 RNA5SP39-201ENST00000411245 120 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC108032.1-201ENST00000416706 207 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 TXNP1-201ENST00000441872 371 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 RNU7-138P-201ENST00000459479 64 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC087884.1-201ENST00000469738 328 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms