Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 RNU6-173P-201ENST00000364215 104 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 Y_RNA.333-201ENST00000365274 102 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 Y_RNA.431-201ENST00000384086 102 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 BX323014.1-201ENST00000412876 237 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 PRDX3P3-201ENST00000447765 522 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 RPS24P6-201ENST00000452670 400 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC010285.1-201ENST00000470580 392 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 RPL7P49-201ENST00000471402 708 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC084198.1-201ENST00000477747 402 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC096576.1-201ENST00000489014 359 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 CCDC34P1-201ENST00000507441 517 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC110768.1-201ENST00000509222 400 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 FAM206BP-201ENST00000510179 541 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 FTH1P9-201ENST00000513251 355 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 SNORA31.3-201ENST00000516029 96 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 RPL7P20-201ENST00000520308 745 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AL118558.2-201ENST00000556294 238 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC005951.2-201ENST00000576282 495 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 FAM60BP-201ENST00000578364 658 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 MIR5583-1-201ENST00000580941 59 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 MIR4742-201ENST00000581069 85 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC104763.2-201ENST00000604179 382 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AL360085.1-201ENST00000604713 532 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC012314.7-201ENST00000619693 93 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 AC119674.1-207ENST00000641355 633 ntBASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC62Q6P9F0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AP001486.2-201ENST00000561652 5113 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 PRO1804-201ENST00000623780 2050 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU6-14P-201ENST00000384630 106 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AL138878.1-201ENST00000405131 347 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 SNORA11.1-201ENST00000408133 129 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RPS29P4-201ENST00000414733 161 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 EI24P1-201ENST00000416584 867 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 TOMM22P1-201ENST00000418578 312 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 NCOR1P3-201ENST00000420479 303 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AL353729.1-201ENST00000425044 720 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC011742.1-201ENST00000431448 434 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 SNRPGP5-201ENST00000456003 220 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU6-1208P-201ENST00000459588 107 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU6-329P-201ENST00000459618 107 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RN7SL293P-201ENST00000481765 281 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 Y_RNA.654-201ENST00000497848 106 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 GMPSP1-201ENST00000514075 579 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RN7SKP18-201ENST00000516005 275 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU4-49P-201ENST00000516080 140 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RNU6-123P-201ENST00000516163 102 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RN7SKP60-201ENST00000516985 239 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 RN7SKP256-201ENST00000517201 314 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC090877.1-201ENST00000561418 344 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 HMGB1P50-201ENST00000605814 607 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC092807.2-201ENST00000609367 243 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 AL360181.4-201ENST00000621752 134 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 C2orf27A-204ENST00000623058 969 ntBASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC62Q6P9F0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CCDC62Q6P9F0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC62Q6P9F0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC62Q6P9F0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 Y_RNA.167-201ENST00000363735 109 ntBASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 RNU6-82P-201ENST00000363970 107 ntBASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 RNU6-190P-201ENST00000384154 102 ntBASIC4.21□□□□□ -1.74
CCDC62Q6P9F0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms