Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.41□□□□□ -1.86
ALFQ53S48 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.41□□□□□ -1.86
ALFQ53S48 SCARNA24.1-201ENST00000516465 137 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 RNU6-572P-201ENST00000516724 80 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 RNU6-410P-201ENST00000517006 107 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.41□□□□□ -1.86
ALFQ53S48 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.41□□□□□ -1.86
ALFQ53S48 AC021739.1-201ENST00000559631 174 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.41□□□□□ -1.86
ALFQ53S48 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.41□□□□□ -1.86
ALFQ53S48 AC007151.1-201ENST00000572774 483 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 AL451007.1-201ENST00000595491 289 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.41□□□□□ -1.86
ALFQ53S48 AC007179.3-201ENST00000604976 235 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 AC012409.4-201ENST00000612923 249 ntBASIC3.41□□□□□ -1.86
ALFQ53S48 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
ALFQ53S48 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALFQ53S48 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ALFQ53S48 OR5J1P-201ENST00000313544 939 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 Y_RNA.22-201ENST00000362492 102 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 Y_RNA.33-201ENST00000362591 102 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 Y_RNA.77-201ENST00000362962 107 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 RNU6-179P-201ENST00000363350 107 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.4□□□□□ -1.87
ALFQ53S48 RNU6-1025P-201ENST00000410629 104 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 RNA5SP120-201ENST00000410900 112 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC007560.1-201ENST00000426912 237 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 UBBP3-201ENST00000445497 241 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC079781.2-201ENST00000446424 169 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 Z75741.1-201ENST00000446793 314 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 RPL31P3-201ENST00000458430 332 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC098591.2-201ENST00000510152 315 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 RNU6-1183P-201ENST00000517054 60 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
ALFQ53S48 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.4□□□□□ -1.87
ALFQ53S48 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ALFQ53S48 AP000873.5-201ENST00000533906 236 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.4□□□□□ -1.87
ALFQ53S48 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.4□□□□□ -1.87
ALFQ53S48 MIR1273C-201ENST00000578669 77 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.4□□□□□ -1.87
ALFQ53S48 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.4□□□□□ -1.87
ALFQ53S48 AC110760.3-201ENST00000598794 467 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AL137843.1-201ENST00000605078 385 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC019159.1-201ENST00000605094 187 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 AC087752.4-201ENST00000605911 462 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
ALFQ53S48 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
ALFQ53S48 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.87
ALFQ53S48 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ALFQ53S48 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ALFQ53S48 RNU6-395P-201ENST00000365662 106 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 SNORA24.1-201ENST00000384401 135 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 MTND3P17-201ENST00000416968 344 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AL353706.1-201ENST00000436728 494 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AL513043.1-201ENST00000439124 535 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.39□□□□□ -1.87
ALFQ53S48 KATNBL1P3-201ENST00000443475 909 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 OSTCP8-201ENST00000445117 448 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.39□□□□□ -1.87
ALFQ53S48 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.39□□□□□ -1.87
ALFQ53S48 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC116562.3-201ENST00000506136 177 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.39□□□□□ -1.87
ALFQ53S48 AC009902.1-201ENST00000519351 183 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC068587.5-201ENST00000528506 175 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALFQ53S48 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.39□□□□□ -1.87
ALFQ53S48 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.39□□□□□ -1.87
ALFQ53S48 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.39□□□□□ -1.87
ALFQ53S48 AC015917.1-201ENST00000579654 510 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC098848.2-201ENST00000588023 330 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC007938.3-201ENST00000604965 623 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC109347.2-201ENST00000610220 349 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 MIR7112-201ENST00000616126 65 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC072046.2-201ENST00000618366 268 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 AC138649.3-201ENST00000622154 254 ntBASIC3.39□□□□□ -1.87
ALFQ53S48 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
ALFQ53S48 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ALFQ53S48 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ALFQ53S48 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ALFQ53S48 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.38□□□□□ -1.87
ALFQ53S48 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ALFQ53S48 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
ALFQ53S48 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALFQ53S48 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AL512633.1-201ENST00000399931 655 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AL356057.2-201ENST00000403318 432 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AL357075.1-201ENST00000404107 726 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.38□□□□□ -1.87
ALFQ53S48 USP9YP6-201ENST00000413550 854 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AC006946.1-201ENST00000429106 328 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 GPR143P-201ENST00000434155 205 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.38□□□□□ -1.87
ALFQ53S48 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms