Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RNU6-512P-201ENST00000364438 103 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.414-201ENST00000384011 101 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 EIF4E2P1-201ENST00000393781 255 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL391417.1-201ENST00000404100 426 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RPL7P10-201ENST00000417407 739 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 HSPD1P21-201ENST00000436541 245 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 NDUFA5P4-201ENST00000436704 385 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RPS24P13-201ENST00000442520 397 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RNU7-167P-201ENST00000459160 62 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RPL21P41-201ENST00000459863 264 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RNU2-69P-201ENST00000516061 100 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 RNU2-58P-201ENST00000516403 183 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC011611.1-201ENST00000552179 197 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC005668.1-201ENST00000571142 476 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 MIR3941-201ENST00000582572 103 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC005498.1-201ENST00000592125 465 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC243960.4-201ENST00000600532 288 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL161798.1-201ENST00000604630 131 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AL354798.1-201ENST00000622505 329 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 MTND1P37-201ENST00000636562 264 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 AC112487.2-201ENST00000637950 304 ntBASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
KHDC1Q4VXA5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KHDC1Q4VXA5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KHDC1Q4VXA5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KHDC1Q4VXA5 MAPK10-373ENST00000641983 6772 ntBASIC3.84□□□□□ -1.8
KHDC1Q4VXA5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RNU4-73P-201ENST00000363164 141 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 SNORD113-7-201ENST00000363762 77 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RNU6-694P-201ENST00000364071 147 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 SNORA4.3-201ENST00000365564 137 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 U1.1-201ENST00000384101 164 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RNU6-1013P-201ENST00000384180 107 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC009237.8-201ENST00000445492 379 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 MRPL50P4-201ENST00000446432 475 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RNU7-66P-201ENST00000459469 62 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RPL21P104-201ENST00000464143 478 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RPL7P5-201ENST00000471472 736 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC103851.1-201ENST00000506833 274 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 RN7SKP83-201ENST00000516512 178 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC090136.1-201ENST00000520009 240 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC105029.1-201ENST00000520250 669 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC090115.3-201ENST00000553218 849 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 SCOCP1-201ENST00000554676 349 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC026464.5-201ENST00000562497 722 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 MIR5692A1-201ENST00000580523 69 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 MIR4719-201ENST00000585233 84 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 CTHRC1P1-201ENST00000605383 469 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AL132765.2-201ENST00000610812 351 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 TPTEP1-208ENST00000636884 213 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.83□□□□□ -1.8
KHDC1Q4VXA5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 ZNF285B-201ENST00000561698 1767 ntBASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
KHDC1Q4VXA5 RNU6-741P-201ENST00000383889 107 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms