Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.24□□□□□ -2.05
RFX4Q33E94 MTND5P2-201ENST00000442927 1142 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC104389.3-201ENST00000445629 235 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AP000936.2-201ENST00000447151 681 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 SNORD109B-201ENST00000458961 67 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 SNORD109A-201ENST00000459128 67 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RPS20P22-201ENST00000473700 357 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RBM43P1-201ENST00000476891 1081 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU6-64P-201ENST00000517119 105 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 ZNF321P-202ENST00000550843 495 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.24□□□□□ -2.05
RFX4Q33E94 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 DPPA3P3-201ENST00000603842 430 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AL160281.1-201ENST00000605307 311 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AC004908.2-201ENST00000609090 574 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 AC004852.3-201ENST00000614131 326 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 RNU6-500P-201ENST00000362349 107 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 MIR27B-201ENST00000385129 97 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 RPS20P2-201ENST00000402520 389 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 RPL23AP39-201ENST00000415533 405 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC010153.1-201ENST00000432862 727 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX4Q33E94 ELOCP30-201ENST00000447108 299 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AC020550.1-201ENST00000447385 163 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX4Q33E94 RNU7-59P-201ENST00000459101 61 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC090096.1-201ENST00000489168 390 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 SNORA3.4-201ENST00000515969 96 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AP000907.2-201ENST00000530827 353 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC007115.1-201ENST00000546853 234 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 GTF3AP2-201ENST00000557014 266 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC025281.1-201ENST00000567026 265 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 RPL23AP84-201ENST00000571193 464 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC136601.2-201ENST00000604356 474 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 AC009159.2-201ENST00000617603 606 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 AL356266.1-201ENST00000623311 483 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.23□□□□□ -2.05
RFX4Q33E94 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.23□□□□□ -2.05
RFX4Q33E94 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFX4Q33E94 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.23□□□□□ -2.05
RFX4Q33E94 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.22□□□□□ -2.05
RFX4Q33E94 FTLP6-201ENST00000355274 422 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 MIR767-201ENST00000390228 109 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AL359634.1-202ENST00000404721 284 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX4Q33E94 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.22□□□□□ -2.05
RFX4Q33E94 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX4Q33E94 ARL5AP4-201ENST00000430731 512 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms