Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 DDX10P1-201ENST00000448545 1933 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SF3A2Q15428 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-461P-201ENST00000364195 107 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-777P-201ENST00000364265 104 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 U8.8-201ENST00000365399 135 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-744P-201ENST00000365557 107 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-1316P-201ENST00000384242 108 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-140P-201ENST00000384566 108 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RNU6-906P-201ENST00000384700 70 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AL513475.1-201ENST00000406602 315 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 Y_RNA.595-201ENST00000410403 105 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC098614.2-201ENST00000426040 255 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RPS25P9-201ENST00000435591 252 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.31□□□□□ -2.04
SF3A2Q15428 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 RPL12P25-201ENST00000455592 494 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
SF3A2Q15428 RPS15AP34-201ENST00000487776 387 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 RPS29P20-201ENST00000489592 171 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC020699.1-201ENST00000505161 445 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC104090.1-201ENST00000506341 1171 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC113155.1-201ENST00000511141 769 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 RN7SKP265-201ENST00000516448 223 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.31□□□□□ -2.04
SF3A2Q15428 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.31□□□□□ -2.04
SF3A2Q15428 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.31□□□□□ -2.04
SF3A2Q15428 MTATP6P24-201ENST00000576835 677 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 OR4K7P-201ENST00000580232 945 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AL161729.4-201ENST00000604650 476 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AL450336.1-201ENST00000605180 586 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC009318.2-201ENST00000610917 651 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC109809.1-201ENST00000619665 545 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 AC009268.2-201ENST00000621925 457 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.31□□□□□ -2.04
SF3A2Q15428 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.31□□□□□ -2.04
SF3A2Q15428 MTND1P37-201ENST00000636562 264 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SF3A2Q15428 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
SF3A2Q15428 CCT4P2-201ENST00000233836 1548 ntBASIC2.31□□□□□ -2.04
SF3A2Q15428 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SF3A2Q15428 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SF3A2Q15428 Y_RNA.311-201ENST00000365068 96 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 RNU6-14P-201ENST00000384630 106 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 RNA5SP213-201ENST00000391031 106 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
SF3A2Q15428 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.3□□□□□ -2.04
SF3A2Q15428 MTATP6P17-201ENST00000431030 672 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AL117351.1-201ENST00000438864 766 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.3□□□□□ -2.04
SF3A2Q15428 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.3□□□□□ -2.04
SF3A2Q15428 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.3□□□□□ -2.04
SF3A2Q15428 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.3□□□□□ -2.04
SF3A2Q15428 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.3□□□□□ -2.04
SF3A2Q15428 RN7SKP210-201ENST00000459176 261 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 MRPS17P3-201ENST00000465453 385 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC104563.1-201ENST00000476147 376 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 RPL37P25-201ENST00000507308 276 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC114786.4-201ENST00000508771 728 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.3□□□□□ -2.04
SF3A2Q15428 CDC42P4-201ENST00000510507 563 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC079395.1-201ENST00000510981 262 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC114797.1-201ENST00000514003 728 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 SCARNA17.1-201ENST00000516211 143 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 SCARNA17.2-201ENST00000516334 143 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 RNA5SP291-201ENST00000517222 105 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC026407.1-201ENST00000518369 204 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC002545.1-201ENST00000592511 181 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC004987.4-201ENST00000603383 338 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.3□□□□□ -2.04
SF3A2Q15428 SCARNA17.4-201ENST00000614296 143 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC010133.1-201ENST00000615809 842 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.3□□□□□ -2.04
SF3A2Q15428 AC006386.1-201ENST00000619436 415 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 AC013470.4-201ENST00000619978 986 ntBASIC2.3□□□□□ -2.04
SF3A2Q15428 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms