Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.36□□□□□ -2.03
RAB40BQ12829 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AC103810.1-201ENST00000579873 453 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AL353778.1-201ENST00000603149 408 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 RPL23AP88-201ENST00000605759 454 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AC087683.2-201ENST00000611384 326 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 MIR7844-201ENST00000616161 122 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AC006338.1-201ENST00000618453 749 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 AP002791.1-201ENST00000623291 381 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RAB40BQ12829 AC068057.2-201ENST00000624047 895 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
RAB40BQ12829 U2.21-201ENST00000637295 81 ntBASIC2.36□□□□□ -2.03
RAB40BQ12829 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
RAB40BQ12829 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
RAB40BQ12829 AC092104.1-201ENST00000497346 1441 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNU6-778P-201ENST00000363269 103 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNU1-140P-201ENST00000365040 165 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNU1-109P-201ENST00000383960 147 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 MIR627-201ENST00000384979 97 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNA5SP21-201ENST00000410917 96 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RPL26P27-201ENST00000414397 437 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL096701.2-201ENST00000416920 238 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.35□□□□□ -2.03
RAB40BQ12829 ISCA1P1-201ENST00000426679 387 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 HMGB1P9-201ENST00000429856 646 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40BQ12829 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.35□□□□□ -2.03
RAB40BQ12829 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
RAB40BQ12829 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40BQ12829 RN7SL432P-201ENST00000484057 298 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNA5SP341-201ENST00000516261 117 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RNU1-103P-201ENST00000516502 125 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC025881.1-201ENST00000518851 512 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.35□□□□□ -2.03
RAB40BQ12829 AC107934.1-201ENST00000522215 217 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.35□□□□□ -2.03
RAB40BQ12829 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40BQ12829 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RAB40BQ12829 ARL2BPP2-201ENST00000550907 489 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 RPS3AP4-201ENST00000555161 764 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.35□□□□□ -2.03
RAB40BQ12829 MIR3200-201ENST00000580767 85 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC090616.2-202ENST00000584248 222 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.6-201ENST00000603753 252 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.11-201ENST00000604059 253 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC008162.1-201ENST00000604718 254 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.1-201ENST00000604752 252 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.5-201ENST00000605253 252 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.12-201ENST00000605291 253 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.8-201ENST00000605353 252 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC105129.3-201ENST00000605455 485 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL670379.7-201ENST00000605823 252 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 DUSP12P1-201ENST00000612874 516 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC009159.2-201ENST00000617603 606 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AL589994.2-201ENST00000621124 579 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 FRG1KP-201ENST00000623592 341 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC008993.2-201ENST00000631744 806 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 AC110491.1-201ENST00000562191 2010 ntBASIC2.35□□□□□ -2.03
RAB40BQ12829 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RAB40BQ12829 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RAB40BQ12829 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 RNU2-36P-201ENST00000410361 191 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 RPL19P1-201ENST00000411635 428 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 RPS15AP12-201ENST00000419498 388 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 AC019097.1-201ENST00000424783 735 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 MED14P1-201ENST00000430517 648 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 MTND4P25-201ENST00000441039 533 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 DPPA3P1-201ENST00000448050 469 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 AL590365.1-201ENST00000450788 243 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 SNORD97-201ENST00000459187 142 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 S100A11P2-201ENST00000467589 312 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.34□□□□□ -2.03
RAB40BQ12829 MRPS36P5-201ENST00000551909 298 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC007363.1-201ENST00000604736 620 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC025594.3-201ENST00000613068 790 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40BQ12829 AC091953.2-201ENST00000623979 160 ntBASIC2.34□□□□□ -2.03
RAB40BQ12829 AC079416.3-201ENST00000624479 549 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms