Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.57□□□□□ -2
SRPXP78539 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.57□□□□□ -2
SRPXP78539 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.57□□□□□ -2
SRPXP78539 AC104763.2-201ENST00000604179 382 ntBASIC2.57□□□□□ -2
SRPXP78539 AL021997.1-201ENST00000605757 193 ntBASIC2.57□□□□□ -2
SRPXP78539 AL365204.3-201ENST00000612448 685 ntBASIC2.57□□□□□ -2
SRPXP78539 AC068792.1-201ENST00000621354 417 ntBASIC2.57□□□□□ -2
SRPXP78539 AC007998.5-201ENST00000622938 237 ntBASIC2.57□□□□□ -2
SRPXP78539 MTND5P42-201ENST00000637720 498 ntBASIC2.57□□□□□ -2
SRPXP78539 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRPXP78539 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SRPXP78539 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRPXP78539 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRPXP78539 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.57□□□□□ -2
SRPXP78539 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.56□□□□□ -2
SRPXP78539 AL161912.2-201ENST00000565707 3007 ntBASIC2.56□□□□□ -2
SRPXP78539 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRPXP78539 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRPXP78539 RNU6-61P-201ENST00000365528 109 ntBASIC2.56□□□□□ -2
SRPXP78539 RNU6-190P-201ENST00000384154 102 ntBASIC2.56□□□□□ -2
SRPXP78539 RNU6-1215P-201ENST00000384441 102 ntBASIC2.56□□□□□ -2
SRPXP78539 RNA5SP252-201ENST00000391131 119 ntBASIC2.56□□□□□ -2
SRPXP78539 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRPXP78539 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.56□□□□□ -2
SRPXP78539 CALM2P3-201ENST00000400429 449 ntBASIC2.56□□□□□ -2
SRPXP78539 UBE2V1P10-201ENST00000414685 269 ntBASIC2.56□□□□□ -2
SRPXP78539 MRPL50P2-201ENST00000416821 482 ntBASIC2.56□□□□□ -2
SRPXP78539 MTATP6P18-201ENST00000417994 673 ntBASIC2.56□□□□□ -2
SRPXP78539 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRPXP78539 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.56□□□□□ -2
SRPXP78539 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 HMGB1P27-201ENST00000431429 603 ntBASIC2.56□□□□□ -2
SRPXP78539 AC073063.1-201ENST00000434352 607 ntBASIC2.56□□□□□ -2
SRPXP78539 HSPD1P21-201ENST00000436541 245 ntBASIC2.56□□□□□ -2
SRPXP78539 RPS24P13-201ENST00000442520 397 ntBASIC2.56□□□□□ -2
SRPXP78539 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.56□□□□□ -2
SRPXP78539 NOTCH2P1-201ENST00000443481 624 ntBASIC2.56□□□□□ -2
SRPXP78539 CECR9-201ENST00000453421 199 ntBASIC2.56□□□□□ -2
SRPXP78539 RPL12P25-201ENST00000455592 494 ntBASIC2.56□□□□□ -2
SRPXP78539 AL590639.1-201ENST00000456484 337 ntBASIC2.56□□□□□ -2
SRPXP78539 AC093899.1-201ENST00000457984 376 ntBASIC2.56□□□□□ -2
SRPXP78539 AC087588.1-201ENST00000462203 316 ntBASIC2.56□□□□□ -2
SRPXP78539 AC126389.1-201ENST00000477436 290 ntBASIC2.56□□□□□ -2
SRPXP78539 AL160314.1-201ENST00000490836 438 ntBASIC2.56□□□□□ -2
SRPXP78539 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.56□□□□□ -2
SRPXP78539 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.56□□□□□ -2
SRPXP78539 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.56□□□□□ -2
SRPXP78539 SNORD27.1-201ENST00000516319 72 ntBASIC2.56□□□□□ -2
SRPXP78539 Y_RNA.689-201ENST00000516589 107 ntBASIC2.56□□□□□ -2
SRPXP78539 RNA5SP290-201ENST00000517133 127 ntBASIC2.56□□□□□ -2
SRPXP78539 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.56□□□□□ -2
SRPXP78539 OR5AL2P-201ENST00000532185 920 ntBASIC2.56□□□□□ -2
SRPXP78539 NCAPGP2-201ENST00000557911 754 ntBASIC2.56□□□□□ -2
SRPXP78539 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 AC034105.3-201ENST00000565294 442 ntBASIC2.56□□□□□ -2
SRPXP78539 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.56□□□□□ -2
SRPXP78539 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 AC012119.1-201ENST00000603184 222 ntBASIC2.56□□□□□ -2
SRPXP78539 AC136601.2-201ENST00000604356 474 ntBASIC2.56□□□□□ -2
SRPXP78539 AL158032.1-201ENST00000605401 106 ntBASIC2.56□□□□□ -2
SRPXP78539 AC004492.1-201ENST00000607036 742 ntBASIC2.56□□□□□ -2
SRPXP78539 AC022893.3-201ENST00000607665 437 ntBASIC2.56□□□□□ -2
SRPXP78539 AC092954.2-201ENST00000609103 430 ntBASIC2.56□□□□□ -2
SRPXP78539 MIR6076-201ENST00000617521 113 ntBASIC2.56□□□□□ -2
SRPXP78539 AC025034.2-201ENST00000623264 286 ntBASIC2.56□□□□□ -2
SRPXP78539 AL359740.1-201ENST00000624340 592 ntBASIC2.56□□□□□ -2
SRPXP78539 AC124864.2-201ENST00000624736 186 ntBASIC2.56□□□□□ -2
SRPXP78539 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.56□□□□□ -2
SRPXP78539 AL157786.1-207ENST00000627771 695 ntBASIC2.56□□□□□ -2
SRPXP78539 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
SRPXP78539 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRPXP78539 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRPXP78539 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRPXP78539 OR4G2P-201ENST00000328113 903 ntBASIC2.55□□□□□ -2
SRPXP78539 FTLP6-201ENST00000355274 422 ntBASIC2.55□□□□□ -2
SRPXP78539 RNU6-1097P-201ENST00000363586 107 ntBASIC2.55□□□□□ -2
SRPXP78539 Y_RNA.245-201ENST00000364493 95 ntBASIC2.55□□□□□ -2
SRPXP78539 Y_RNA.372-201ENST00000365599 102 ntBASIC2.55□□□□□ -2
SRPXP78539 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRPXP78539 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SRPXP78539 SNORA1.3-201ENST00000384676 136 ntBASIC2.55□□□□□ -2
SRPXP78539 RNU6-817P-201ENST00000391083 104 ntBASIC2.55□□□□□ -2
SRPXP78539 RPS12P24-201ENST00000412619 387 ntBASIC2.55□□□□□ -2
SRPXP78539 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.55□□□□□ -2
SRPXP78539 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.55□□□□□ -2
SRPXP78539 AC092047.1-201ENST00000424997 240 ntBASIC2.55□□□□□ -2
SRPXP78539 ISCA1P1-201ENST00000426679 387 ntBASIC2.55□□□□□ -2
SRPXP78539 AC104332.2-201ENST00000429959 156 ntBASIC2.55□□□□□ -2
SRPXP78539 AL591212.2-201ENST00000433923 257 ntBASIC2.55□□□□□ -2
SRPXP78539 SNRPEP4-201ENST00000435815 279 ntBASIC2.55□□□□□ -2
SRPXP78539 ZNF680P1-201ENST00000436625 1469 ntBASIC2.55□□□□□ -2
SRPXP78539 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.55□□□□□ -2
SRPXP78539 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.55□□□□□ -2
SRPXP78539 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.55□□□□□ -2
SRPXP78539 MTND1P1-201ENST00000445453 368 ntBASIC2.55□□□□□ -2
SRPXP78539 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRPXP78539 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms