Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNU6-715P-201ENST00000365204 103 ntBASIC3.45□□□□□ -1.86
RAE1P78406 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 RNU6-741P-201ENST00000383889 107 ntBASIC3.45□□□□□ -1.86
RAE1P78406 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RAE1P78406 AL356432.1-201ENST00000405809 419 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNU2-33P-201ENST00000410344 192 ntBASIC3.45□□□□□ -1.86
RAE1P78406 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 RAC1P3-201ENST00000416129 580 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.45□□□□□ -1.86
RAE1P78406 HSPE1P1-201ENST00000421494 318 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AL669831.1-202ENST00000428504 417 ntBASIC3.45□□□□□ -1.86
RAE1P78406 HSPD1P21-201ENST00000436541 245 ntBASIC3.45□□□□□ -1.86
RAE1P78406 GTF2IP13-201ENST00000438487 386 ntBASIC3.45□□□□□ -1.86
RAE1P78406 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.45□□□□□ -1.86
RAE1P78406 RPL21P104-201ENST00000464143 478 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RPL21P93-201ENST00000480465 489 ntBASIC3.45□□□□□ -1.86
RAE1P78406 TTC39CP1-201ENST00000512513 755 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNU4-49P-201ENST00000516080 140 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNU6-189P-201ENST00000516120 101 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNA5SP468-201ENST00000516782 93 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RNA5SP471-201ENST00000516971 106 ntBASIC3.45□□□□□ -1.86
RAE1P78406 RN7SKP256-201ENST00000517201 314 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.45□□□□□ -1.86
RAE1P78406 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.45□□□□□ -1.86
RAE1P78406 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.45□□□□□ -1.86
RAE1P78406 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.45□□□□□ -1.86
RAE1P78406 AC037471.2-201ENST00000564941 598 ntBASIC3.45□□□□□ -1.86
RAE1P78406 MIR3160-1-201ENST00000577972 85 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.45□□□□□ -1.86
RAE1P78406 AC092747.3-201ENST00000603769 301 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AL161798.1-201ENST00000604630 131 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC006077.1-201ENST00000604746 343 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC103705.1-201ENST00000619013 241 ntBASIC3.45□□□□□ -1.86
RAE1P78406 AC005858.4-201ENST00000623191 700 ntBASIC3.45□□□□□ -1.86
RAE1P78406 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
RAE1P78406 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.45□□□□□ -1.86
RAE1P78406 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RAE1P78406 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.45□□□□□ -1.86
RAE1P78406 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 AL353746.1-201ENST00000566293 6881 ntBASIC3.45□□□□□ -1.86
RAE1P78406 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
RAE1P78406 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RAE1P78406 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RAE1P78406 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
RAE1P78406 Y_RNA.11-201ENST00000362375 109 ntBASIC3.44□□□□□ -1.86
RAE1P78406 RN7SKP280-201ENST00000364196 304 ntBASIC3.44□□□□□ -1.86
RAE1P78406 Y_RNA.373-201ENST00000365600 103 ntBASIC3.44□□□□□ -1.86
RAE1P78406 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RAE1P78406 RNU6-393P-201ENST00000384475 107 ntBASIC3.44□□□□□ -1.86
RAE1P78406 SNORA16.2-201ENST00000390991 127 ntBASIC3.44□□□□□ -1.86
RAE1P78406 SNORD70.1-201ENST00000391007 85 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AL139039.1-201ENST00000401900 692 ntBASIC3.44□□□□□ -1.86
RAE1P78406 RAB28P1-201ENST00000411517 641 ntBASIC3.44□□□□□ -1.86
RAE1P78406 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.44□□□□□ -1.86
RAE1P78406 NCOR1P3-201ENST00000420479 303 ntBASIC3.44□□□□□ -1.86
RAE1P78406 CYP4F29P-201ENST00000420685 446 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.44□□□□□ -1.86
RAE1P78406 AC006989.1-201ENST00000427212 131 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.44□□□□□ -1.86
RAE1P78406 PRPS1P1-201ENST00000445305 876 ntBASIC3.44□□□□□ -1.86
RAE1P78406 RNU6-329P-201ENST00000459618 107 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.44□□□□□ -1.86
RAE1P78406 FGF7P4-201ENST00000509595 295 ntBASIC3.44□□□□□ -1.86
RAE1P78406 HIGD1AP13-201ENST00000509878 289 ntBASIC3.44□□□□□ -1.86
RAE1P78406 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.44□□□□□ -1.86
RAE1P78406 RNU7-30P-201ENST00000516835 62 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.44□□□□□ -1.86
RAE1P78406 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.44□□□□□ -1.86
RAE1P78406 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
RAE1P78406 SCOCP1-201ENST00000554676 349 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.44□□□□□ -1.86
RAE1P78406 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
RAE1P78406 AL022345.1-201ENST00000607292 135 ntBASIC3.44□□□□□ -1.86
RAE1P78406 U2.17-201ENST00000611454 95 ntBASIC3.44□□□□□ -1.86
RAE1P78406 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.44□□□□□ -1.86
RAE1P78406 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
RAE1P78406 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
RAE1P78406 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RAE1P78406 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RAE1P78406 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.43□□□□□ -1.86
RAE1P78406 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.43□□□□□ -1.86
RAE1P78406 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.43□□□□□ -1.86
RAE1P78406 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RAE1P78406 MTND4P29-201ENST00000503122 1372 ntBASIC3.43□□□□□ -1.86
RAE1P78406 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RAE1P78406 MIR423-201ENST00000362201 94 ntBASIC3.43□□□□□ -1.86
RAE1P78406 RNU6-50P-201ENST00000362356 103 ntBASIC3.43□□□□□ -1.86
RAE1P78406 Y_RNA.356-201ENST00000365475 113 ntBASIC3.43□□□□□ -1.86
RAE1P78406 Y_RNA.414-201ENST00000384011 101 ntBASIC3.43□□□□□ -1.86
RAE1P78406 RNU6-434P-201ENST00000384376 107 ntBASIC3.43□□□□□ -1.86
RAE1P78406 RNU6-831P-201ENST00000384548 107 ntBASIC3.43□□□□□ -1.86
RAE1P78406 RNU2-37P-201ENST00000410695 177 ntBASIC3.43□□□□□ -1.86
RAE1P78406 BX682237.1-201ENST00000415016 335 ntBASIC3.43□□□□□ -1.86
RAE1P78406 RPL7P10-201ENST00000417407 739 ntBASIC3.43□□□□□ -1.86
RAE1P78406 BTF3L4P3-201ENST00000418879 476 ntBASIC3.43□□□□□ -1.86
RAE1P78406 BX842559.1-201ENST00000419615 532 ntBASIC3.43□□□□□ -1.86
RAE1P78406 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.43□□□□□ -1.86
RAE1P78406 AL353678.1-201ENST00000422735 741 ntBASIC3.43□□□□□ -1.86
RAE1P78406 MTND4P28-201ENST00000426217 387 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms