Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC104164.2-201ENST00000496953 495 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC114801.2-201ENST00000503825 781 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC022447.4-201ENST00000504053 364 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.09□□□□□ -1.75
GFRA1P56159 RNU6-475P-201ENST00000516073 104 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RNA5SP464-201ENST00000516251 108 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 Y_RNA.721-201ENST00000517207 102 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC008269.2-201ENST00000561915 1105 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.09□□□□□ -1.75
GFRA1P56159 AL356218.2-201ENST00000605264 187 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 MIR8069-1-201ENST00000616627 86 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC087588.2-201ENST00000617667 426 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 MIR8069-2-201ENST00000621412 86 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC027309.3-201ENST00000623419 351 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 U6.99-201ENST00000637524 83 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
GFRA1P56159 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC118273.1-201ENST00000525324 3006 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
GFRA1P56159 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
GFRA1P56159 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
GFRA1P56159 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.76
GFRA1P56159 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
GFRA1P56159 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
GFRA1P56159 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.08□□□□□ -1.76
GFRA1P56159 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
GFRA1P56159 AC126755.2-208ENST00000327792 462 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AC138969.1-213ENST00000331436 462 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 Y_RNA.149-201ENST00000363558 117 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
GFRA1P56159 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
GFRA1P56159 Y_RNA.577-201ENST00000384794 101 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MIR521-1-201ENST00000384902 87 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 AL591034.2-201ENST00000402839 359 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MIR1302-3-201ENST00000408128 138 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 CRYBB2P1-203ENST00000415709 538 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AL117339.3-201ENST00000418733 162 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AL356387.2-201ENST00000422272 243 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MRPS18CP6-201ENST00000423587 223 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AC092047.1-201ENST00000424997 240 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MTCYBP9-201ENST00000431021 303 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AC087650.1-201ENST00000431445 468 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 IPO7P1-201ENST00000442031 636 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.08□□□□□ -1.76
GFRA1P56159 MTATP8P1-201ENST00000467115 207 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.08□□□□□ -1.76
GFRA1P56159 AK3P2-201ENST00000507976 429 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MTCO2P24-201ENST00000515611 426 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 OR5D17P-201ENST00000531492 978 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 CBX3P8-201ENST00000532412 525 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MIR4782-201ENST00000577987 79 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MIR3690-201ENST00000580266 75 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AL158196.1-201ENST00000616786 434 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.08□□□□□ -1.76
GFRA1P56159 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.08□□□□□ -1.76
GFRA1P56159 CDC27P3-201ENST00000635418 1910 ntBASIC4.08□□□□□ -1.76
GFRA1P56159 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA1P56159 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.08□□□□□ -1.76
GFRA1P56159 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
GFRA1P56159 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA1P56159 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 Y_RNA.48-201ENST00000362710 103 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RNY1P16-201ENST00000363063 111 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RNU5E-7P-201ENST00000365290 117 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 DEFB109C-201ENST00000382575 264 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 DEFB109B-201ENST00000382656 264 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 Y_RNA.389-201ENST00000383924 113 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 Y_RNA.557-201ENST00000384680 107 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 U3.22-201ENST00000391120 215 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RNU6-101P-201ENST00000410323 104 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RPL36AP10-201ENST00000421785 322 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 Z74021.1-201ENST00000423610 407 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RPS12P10-201ENST00000427031 377 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AC092573.2-201ENST00000434546 243 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 RPS26P2-201ENST00000440331 348 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.07□□□□□ -1.76
GFRA1P56159 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.07□□□□□ -1.76
GFRA1P56159 FTH1P2-201ENST00000466086 412 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 RPL21P126-201ENST00000470049 478 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 HMGN2P13-201ENST00000476476 274 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 FO393415.2-201ENST00000480085 343 ntBASIC4.07□□□□□ -1.76
GFRA1P56159 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.07□□□□□ -1.76
GFRA1P56159 AC105758.1-201ENST00000506038 399 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms