Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 OR1M4P-201ENST00000589199 287 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AP000811.1-201ENST00000603803 651 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC107214.2-201ENST00000608204 634 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL391813.2-201ENST00000609113 322 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX1P55347 U2.21-201ENST00000637295 81 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX1P55347 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PKNOX1P55347 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.34□□□□□ -2.04
PKNOX1P55347 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PKNOX1P55347 AL359693.1-201ENST00000614959 2407 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX1P55347 Y_RNA.18-201ENST00000362461 102 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 Y_RNA.46-201ENST00000362695 102 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6-1167P-201ENST00000363227 94 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6-1214P-201ENST00000363650 109 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6-461P-201ENST00000364195 107 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6-253P-201ENST00000384730 105 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX1P55347 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX1P55347 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 CECR9-201ENST00000453421 199 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 MTCO1P42-201ENST00000457379 726 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RPL26P9-201ENST00000457466 433 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RBM43P1-201ENST00000476891 1081 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RPL23AP70-201ENST00000483361 460 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RPS15AP34-201ENST00000487776 387 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 RPS27AP10-201ENST00000496103 208 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX1P55347 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX1P55347 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.33□□□□□ -2.04
PKNOX1P55347 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AP001004.1-201ENST00000582468 324 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC098826.3-201ENST00000603823 466 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AL161798.1-201ENST00000604630 131 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC004805.2-201ENST00000605382 482 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC108747.1-201ENST00000609508 535 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AC007490.1-201ENST00000624321 703 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX1P55347 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
PKNOX1P55347 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX1P55347 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AL139276.1-201ENST00000311910 1001 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKNOX1P55347 Y_RNA.245-201ENST00000364493 95 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 TAS2R15P-201ENST00000390674 928 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 U8.14-201ENST00000390843 143 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 RNU2-49P-201ENST00000410666 184 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC007064.1-201ENST00000412238 351 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC098592.1-201ENST00000419352 333 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX1P55347 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.32□□□□□ -2.04
PKNOX1P55347 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX1P55347 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.32□□□□□ -2.04
PKNOX1P55347 TIMM9P1-201ENST00000436122 256 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 GDI2P2-201ENST00000445131 608 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX1P55347 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
PKNOX1P55347 RPL23AP41-201ENST00000484754 458 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 RPF2P2-201ENST00000504693 896 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC107222.1-201ENST00000510899 637 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.32□□□□□ -2.04
PKNOX1P55347 SNORA31.3-201ENST00000516029 96 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 RN7SKP265-201ENST00000516448 223 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.32□□□□□ -2.04
PKNOX1P55347 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKNOX1P55347 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.32□□□□□ -2.04
PKNOX1P55347 AL356432.3-201ENST00000568952 465 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
PKNOX1P55347 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AC112187.2-201ENST00000604345 283 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 OR10AB1P-201ENST00000609613 938 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.32□□□□□ -2.04
PKNOX1P55347 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PKNOX1P55347 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKNOX1P55347 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
PKNOX1P55347 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PKNOX1P55347 MTND5P29-201ENST00000458676 1807 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
PKNOX1P55347 RNU6-778P-201ENST00000363269 103 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms