Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SCARNA24.1-201ENST00000516465 137 ntBASIC2.99□□□□□ -1.93
CDH13P55290 RNU6-143P-201ENST00000516942 93 ntBASIC2.99□□□□□ -1.93
CDH13P55290 RNU6-410P-201ENST00000517006 107 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.99□□□□□ -1.93
CDH13P55290 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDH13P55290 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH13P55290 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 AL391261.3-201ENST00000557194 520 ntBASIC2.99□□□□□ -1.93
CDH13P55290 MIR3913-1-201ENST00000577744 102 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 MIR3611-201ENST00000584484 83 ntBASIC2.99□□□□□ -1.93
CDH13P55290 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH13P55290 BNIP3P9-201ENST00000603714 553 ntBASIC2.99□□□□□ -1.93
CDH13P55290 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH13P55290 DUSP12P1-201ENST00000612874 516 ntBASIC2.99□□□□□ -1.93
CDH13P55290 MIR6075-201ENST00000620782 95 ntBASIC2.99□□□□□ -1.93
CDH13P55290 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 AC138649.3-201ENST00000622154 254 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC099506.2-201ENST00000623074 221 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC092656.1-203ENST00000624134 423 ntBASIC2.99□□□□□ -1.93
CDH13P55290 U6.105-201ENST00000637379 88 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC008669.1-201ENST00000565823 2178 ntBASIC2.99□□□□□ -1.93
CDH13P55290 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDH13P55290 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH13P55290 AL049781.1-201ENST00000623195 3585 ntBASIC2.99□□□□□ -1.93
CDH13P55290 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDH13P55290 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CDH13P55290 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CDH13P55290 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDH13P55290 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CDH13P55290 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
CDH13P55290 MIR183-201ENST00000384958 110 ntBASIC2.98□□□□□ -1.93
CDH13P55290 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
CDH13P55290 RNU2-68P-201ENST00000410878 191 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.98□□□□□ -1.93
CDH13P55290 BTF3L4P1-201ENST00000413813 468 ntBASIC2.98□□□□□ -1.93
CDH13P55290 BMS1P22-201ENST00000414726 313 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.98□□□□□ -1.93
CDH13P55290 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.98□□□□□ -1.93
CDH13P55290 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH13P55290 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH13P55290 AL451062.2-201ENST00000427515 271 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AL591704.1-201ENST00000432574 275 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC079448.1-201ENST00000449377 373 ntBASIC2.98□□□□□ -1.93
CDH13P55290 RPL12P25-201ENST00000455592 494 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC126389.1-201ENST00000477436 290 ntBASIC2.98□□□□□ -1.93
CDH13P55290 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CDH13P55290 AC026801.1-201ENST00000497178 464 ntBASIC2.98□□□□□ -1.93
CDH13P55290 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
CDH13P55290 RNU6-1220P-201ENST00000517126 108 ntBASIC2.98□□□□□ -1.93
CDH13P55290 RNA5SP165-201ENST00000517142 115 ntBASIC2.98□□□□□ -1.93
CDH13P55290 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH13P55290 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH13P55290 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH13P55290 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH13P55290 AL359212.1-201ENST00000556608 614 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.98□□□□□ -1.93
CDH13P55290 AL391840.1-201ENST00000571144 367 ntBASIC2.98□□□□□ -1.93
CDH13P55290 MIR4444-1-201ENST00000581696 74 ntBASIC2.98□□□□□ -1.93
CDH13P55290 MIR4444-2-201ENST00000584390 74 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH13P55290 AL589743.7-201ENST00000612637 233 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC091834.1-201ENST00000614543 472 ntBASIC2.98□□□□□ -1.93
CDH13P55290 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
CDH13P55290 U2.21-201ENST00000637295 81 ntBASIC2.98□□□□□ -1.93
CDH13P55290 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.98□□□□□ -1.93
CDH13P55290 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH13P55290 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.98□□□□□ -1.93
CDH13P55290 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDH13P55290 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH13P55290 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH13P55290 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH13P55290 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH13P55290 RNU6-288P-201ENST00000363690 104 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
CDH13P55290 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RNU6-641P-201ENST00000384006 107 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RNU6-190P-201ENST00000384154 102 ntBASIC2.97□□□□□ -1.93
CDH13P55290 SNORA7.4-201ENST00000384249 137 ntBASIC2.97□□□□□ -1.93
CDH13P55290 Y_RNA.534-201ENST00000384599 112 ntBASIC2.97□□□□□ -1.93
CDH13P55290 MIR7-3-201ENST00000384898 110 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RNA5SP274-201ENST00000410484 108 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH13P55290 AL365496.1-201ENST00000426885 215 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 AL591212.2-201ENST00000433923 257 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RPS20P5-201ENST00000434808 360 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC093899.1-201ENST00000457984 376 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
CDH13P55290 RN7SL633P-201ENST00000488974 297 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC026427.2-201ENST00000506228 536 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC114786.4-201ENST00000508771 728 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 MTND3P5-201ENST00000512798 333 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH13P55290 OR5B19P-201ENST00000531766 928 ntBASIC2.97□□□□□ -1.93
CDH13P55290 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms