Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC079416.3-201ENST00000624479 549 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL159972.1-201ENST00000625150 448 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC019226.1-201ENST00000625666 515 ntBASIC2.81□□□□□ -1.96
VCPP55072 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VCPP55072 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
VCPP55072 AP006437.1-201ENST00000641440 3685 ntBASIC2.81□□□□□ -1.96
VCPP55072 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VCPP55072 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.8□□□□□ -1.96
VCPP55072 CCT4P2-201ENST00000233836 1548 ntBASIC2.8□□□□□ -1.96
VCPP55072 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VCPP55072 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VCPP55072 RNU6-500P-201ENST00000362349 107 ntBASIC2.8□□□□□ -1.96
VCPP55072 SNORA36C-201ENST00000384289 132 ntBASIC2.8□□□□□ -1.96
VCPP55072 SPA17P1-201ENST00000416656 452 ntBASIC2.8□□□□□ -1.96
VCPP55072 NDUFB4P7-201ENST00000423198 363 ntBASIC2.8□□□□□ -1.96
VCPP55072 MTND4P20-201ENST00000424125 869 ntBASIC2.8□□□□□ -1.96
VCPP55072 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.8□□□□□ -1.96
VCPP55072 AL139415.2-201ENST00000431968 163 ntBASIC2.8□□□□□ -1.96
VCPP55072 HMGN2P3-201ENST00000433603 273 ntBASIC2.8□□□□□ -1.96
VCPP55072 HMGN2P5-201ENST00000436882 273 ntBASIC2.8□□□□□ -1.96
VCPP55072 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VCPP55072 ST13P20-201ENST00000447996 1065 ntBASIC2.8□□□□□ -1.96
VCPP55072 AP1S2P1-201ENST00000457344 379 ntBASIC2.8□□□□□ -1.96
VCPP55072 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
VCPP55072 AL135752.1-201ENST00000479477 471 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC098862.1-201ENST00000504991 413 ntBASIC2.8□□□□□ -1.96
VCPP55072 MRPS33P3-201ENST00000513456 322 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC096725.1-201ENST00000514266 313 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.8□□□□□ -1.96
VCPP55072 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.8□□□□□ -1.96
VCPP55072 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.8□□□□□ -1.96
VCPP55072 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
VCPP55072 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.8□□□□□ -1.96
VCPP55072 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VCPP55072 MIR4307-201ENST00000582802 84 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC090616.2-202ENST00000584248 222 ntBASIC2.8□□□□□ -1.96
VCPP55072 NIFKP6-201ENST00000598115 845 ntBASIC2.8□□□□□ -1.96
VCPP55072 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VCPP55072 AC004223.4-201ENST00000612426 332 ntBASIC2.8□□□□□ -1.96
VCPP55072 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.8□□□□□ -1.96
VCPP55072 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.8□□□□□ -1.96
VCPP55072 AC091965.5-201ENST00000624785 342 ntBASIC2.8□□□□□ -1.96
VCPP55072 AC092192.1-201ENST00000633154 1018 ntBASIC2.8□□□□□ -1.96
VCPP55072 MIR4275-201ENST00000636486 87 ntBASIC2.8□□□□□ -1.96
VCPP55072 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
VCPP55072 AC092125.1-201ENST00000562568 1995 ntBASIC2.8□□□□□ -1.96
VCPP55072 DDX10P1-201ENST00000448545 1933 ntBASIC2.8□□□□□ -1.96
VCPP55072 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCPP55072 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
VCPP55072 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VCPP55072 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VCPP55072 SET-203ENST00000372688 801 ntTSL 2 BASIC2.79□□□□□ -1.96
VCPP55072 MIR767-201ENST00000390228 109 ntBASIC2.79□□□□□ -1.96
VCPP55072 RNA5SP425-201ENST00000410336 112 ntBASIC2.79□□□□□ -1.96
VCPP55072 RN7SKP223-201ENST00000410582 62 ntBASIC2.79□□□□□ -1.96
VCPP55072 RNU4-53P-201ENST00000410828 140 ntBASIC2.79□□□□□ -1.96
VCPP55072 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.79□□□□□ -1.96
VCPP55072 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
VCPP55072 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.79□□□□□ -1.96
VCPP55072 RPL35AP22-201ENST00000436855 335 ntBASIC2.79□□□□□ -1.96
VCPP55072 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.79□□□□□ -1.96
VCPP55072 TPT1P14-201ENST00000448018 505 ntBASIC2.79□□□□□ -1.96
VCPP55072 RNU7-125P-201ENST00000458760 62 ntBASIC2.79□□□□□ -1.96
VCPP55072 AC135721.1-201ENST00000497954 479 ntBASIC2.79□□□□□ -1.96
VCPP55072 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.79□□□□□ -1.96
VCPP55072 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.79□□□□□ -1.96
VCPP55072 DUXAP5-201ENST00000529668 529 ntBASIC2.79□□□□□ -1.96
VCPP55072 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
VCPP55072 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VCPP55072 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VCPP55072 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.79□□□□□ -1.96
VCPP55072 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.79□□□□□ -1.96
VCPP55072 AC068313.1-201ENST00000604028 1008 ntBASIC2.79□□□□□ -1.96
VCPP55072 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.79□□□□□ -1.96
VCPP55072 AC091965.4-201ENST00000607691 587 ntBASIC2.79□□□□□ -1.96
VCPP55072 AP000676.3-201ENST00000623299 569 ntBASIC2.79□□□□□ -1.96
VCPP55072 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
VCPP55072 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VCPP55072 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCPP55072 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
VCPP55072 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.78□□□□□ -1.96
VCPP55072 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC135776.4-201ENST00000624300 1904 ntBASIC2.78□□□□□ -1.96
VCPP55072 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
VCPP55072 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCPP55072 SNORA23-201ENST00000365128 182 ntBASIC2.78□□□□□ -1.96
VCPP55072 RNU6-432P-201ENST00000384196 109 ntBASIC2.78□□□□□ -1.96
VCPP55072 RNU5A-2P-201ENST00000384337 116 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.78□□□□□ -1.96
VCPP55072 AC107081.1-201ENST00000414975 361 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC018630.2-202ENST00000422992 927 ntBASIC2.78□□□□□ -1.96
VCPP55072 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 RPL7P34-201ENST00000433316 712 ntBASIC2.78□□□□□ -1.96
VCPP55072 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
VCPP55072 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.78□□□□□ -1.96
VCPP55072 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCPP55072 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms