Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H2P55055 AP001893.2-201ENST00000526949 202 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 NACAP3-201ENST00000552100 481 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AC004805.2-201ENST00000605382 482 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AL121992.2-201ENST00000606262 256 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC092954.2-201ENST00000609103 430 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC092794.1-201ENST00000612734 582 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 DUSP12P1-201ENST00000612874 516 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AL359547.2-201ENST00000615810 418 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AL359880.1-201ENST00000621879 266 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H2P55055 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H2P55055 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.4□□□□□ -1.87
NR1H2P55055 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 Y_RNA.372-201ENST00000365599 102 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NR1H2P55055 MIR181A1-201ENST00000385026 110 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 MIR548F1-201ENST00000408667 84 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 NDUFS5P4-201ENST00000412983 318 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.39□□□□□ -1.87
NR1H2P55055 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NR1H2P55055 MTATP6P18-201ENST00000417994 673 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AL109913.1-201ENST00000421173 514 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AL591212.2-201ENST00000433923 257 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 RPS20P5-201ENST00000434808 360 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 RPS15AP9-201ENST00000439856 381 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H2P55055 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.39□□□□□ -1.87
NR1H2P55055 CECR9-201ENST00000453421 199 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 HMGN1P18-201ENST00000457642 277 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 RPL7P5-201ENST00000471472 736 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC126389.1-201ENST00000477436 290 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.39□□□□□ -1.87
NR1H2P55055 AC009646.1-201ENST00000510455 318 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 RAC1P2-201ENST00000511164 579 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H2P55055 RNA5SP471-201ENST00000516971 106 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H2P55055 YPEL5P3-201ENST00000547227 352 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 ZNF519P2-201ENST00000557032 169 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 MTCO3P24-201ENST00000572729 782 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H2P55055 AC012507.3-201ENST00000603556 477 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC025449.1-201ENST00000603896 529 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC007179.3-201ENST00000604976 235 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
NR1H2P55055 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H2P55055 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H2P55055 AC004972.1-201ENST00000623934 2209 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNU6-288P-201ENST00000363690 104 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNU6-74P-201ENST00000384235 107 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AL139397.2-201ENST00000404529 772 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNU2-9P-201ENST00000410194 145 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 AL353193.1-201ENST00000421444 268 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AL591419.1-201ENST00000427423 339 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AL591704.1-201ENST00000432574 275 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 HSPD1P21-201ENST00000436541 245 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 Z99127.3-201ENST00000448158 395 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RPL37P4-201ENST00000448908 268 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.38□□□□□ -1.87
NR1H2P55055 RPL26P9-201ENST00000457466 433 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC126182.1-201ENST00000478134 357 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.38□□□□□ -1.87
NR1H2P55055 MTND4LP22-201ENST00000508209 276 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC114786.4-201ENST00000508771 728 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 RNA5SP165-201ENST00000517142 115 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 MTND4LP26-201ENST00000518144 282 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H2P55055 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC068135.2-201ENST00000569293 1028 ntBASIC3.38□□□□□ -1.87
NR1H2P55055 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H2P55055 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H2P55055 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms